sisl
v0.9.4
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Index
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Index
A
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B
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C
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D
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E
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F
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G
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H
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I
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K
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L
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M
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N
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O
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P
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Q
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R
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S
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T
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U
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V
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W
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X
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Y
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Z
A
a2isc() (sisl.Geometry method)
a2o() (sisl.Geometry method)
a2p() (sisl.io.tbtrans.phtavncSileTBtrans method)
(sisl.io.tbtrans.phtncSileTBtrans method)
(sisl.io.tbtrans.phtsencSileTBtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
(sisl.io.tbtrans.tbtsencSileTBtrans method)
a2sc() (sisl.Geometry method)
a_buf (sisl.io.tbtrans.phtavncSileTBtrans attribute)
(sisl.io.tbtrans.phtncSileTBtrans attribute)
(sisl.io.tbtrans.phtsencSileTBtrans attribute)
(sisl.io.tbtrans.tbtavncSileTBtrans attribute)
(sisl.io.tbtrans.tbtncSileTBtrans attribute)
(sisl.io.tbtrans.tbtsencSileTBtrans attribute)
a_dev (sisl.io.tbtrans.phtavncSileTBtrans attribute)
(sisl.io.tbtrans.phtncSileTBtrans attribute)
(sisl.io.tbtrans.phtsencSileTBtrans attribute)
(sisl.io.tbtrans.tbtavncSileTBtrans attribute)
(sisl.io.tbtrans.tbtncSileTBtrans attribute)
(sisl.io.tbtrans.tbtsencSileTBtrans attribute)
add() (sisl.Atoms method)
(sisl.Geometry method)
(sisl.SuperCell method)
add_sile() (in module sisl.io)
add_vacuum() (sisl.Geometry method)
(sisl.Grid method)
(sisl.SuperCell method)
Adensity_matrix() (sisl.io.tbtrans.phtavncSileTBtrans method)
(sisl.io.tbtrans.phtncSileTBtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
ADOS() (sisl.io.tbtrans.phtavncSileTBtrans method)
(sisl.io.tbtrans.phtncSileTBtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
align() (sisl.SparseCSR method)
angle (sisl.Quaternion attribute)
angle() (in module sisl.utils)
(sisl.Geometry method)
(sisl.SuperCell method)
append() (sisl.Atoms method)
(sisl.Geometry method)
(sisl.Grid method)
(sisl.Selector method)
(sisl.SuperCell method)
apply_newton() (sisl.physics.DynamicalMatrix method)
args (sisl.io.SileError attribute)
array_arange() (in module sisl.utils)
as_integer_ratio() (sisl.constant.PhysicalConstant method)
as_primary() (sisl.Geometry method)
asarray() (sisl.physics.BandStructure method)
(sisl.physics.BrillouinZone method)
(sisl.physics.MonkhorstPack method)
(sisl.physics.brillouinzone.BandStructure method)
(sisl.physics.brillouinzone.BrillouinZone method)
(sisl.physics.brillouinzone.MonkhorstPack method)
asaverage() (sisl.physics.BandStructure method)
(sisl.physics.BrillouinZone method)
(sisl.physics.MonkhorstPack method)
(sisl.physics.brillouinzone.BandStructure method)
(sisl.physics.brillouinzone.BrillouinZone method)
(sisl.physics.brillouinzone.MonkhorstPack method)
asc2uc() (sisl.Geometry method)
asciiSileBigDFT (class in sisl.io.bigdft)
asCoefficient() (sisl.physics.EigenmodePhonon method)
(sisl.physics.EigenstateElectron method)
(sisl.physics.StateC method)
(sisl.physics.electron.EigenstateElectron method)
(sisl.physics.electron.StateCElectron method)
(sisl.physics.phonon.EigenmodePhonon method)
(sisl.physics.phonon.ModeCPhonon method)
asgrid() (sisl.physics.brillouinzone.MonkhorstPack method)
(sisl.physics.MonkhorstPack method)
aslist() (sisl.physics.BandStructure method)
(sisl.physics.BrillouinZone method)
(sisl.physics.MonkhorstPack method)
(sisl.physics.brillouinzone.BandStructure method)
(sisl.physics.brillouinzone.BrillouinZone method)
(sisl.physics.brillouinzone.MonkhorstPack method)
asnone() (sisl.physics.BandStructure method)
(sisl.physics.BrillouinZone method)
(sisl.physics.MonkhorstPack method)
(sisl.physics.brillouinzone.BandStructure method)
(sisl.physics.brillouinzone.BrillouinZone method)
(sisl.physics.brillouinzone.MonkhorstPack method)
asState() (sisl.physics.EigenmodePhonon method)
(sisl.physics.EigenstateElectron method)
(sisl.physics.StateC method)
(sisl.physics.electron.EigenstateElectron method)
(sisl.physics.electron.StateCElectron method)
(sisl.physics.phonon.EigenmodePhonon method)
(sisl.physics.phonon.ModeCPhonon method)
assum() (sisl.physics.BandStructure method)
(sisl.physics.BrillouinZone method)
(sisl.physics.MonkhorstPack method)
(sisl.physics.brillouinzone.BandStructure method)
(sisl.physics.brillouinzone.BrillouinZone method)
(sisl.physics.brillouinzone.MonkhorstPack method)
asyield() (sisl.physics.BandStructure method)
(sisl.physics.BrillouinZone method)
(sisl.physics.MonkhorstPack method)
(sisl.physics.brillouinzone.BandStructure method)
(sisl.physics.brillouinzone.BrillouinZone method)
(sisl.physics.brillouinzone.MonkhorstPack method)
Atom (class in sisl)
atom (sisl.Atoms attribute)
(sisl.Geometry attribute)
atom_ACOHP() (sisl.io.tbtrans.phtavncSileTBtrans method)
(sisl.io.tbtrans.phtncSileTBtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
atom_ACOOP() (sisl.io.tbtrans.phtavncSileTBtrans method)
(sisl.io.tbtrans.phtncSileTBtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
atom_COHP() (sisl.io.tbtrans.phtavncSileTBtrans method)
(sisl.io.tbtrans.phtncSileTBtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
atom_COHP_from_orbital() (sisl.io.tbtrans.phtavncSileTBtrans method)
(sisl.io.tbtrans.phtncSileTBtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
atom_COOP() (sisl.io.tbtrans.phtavncSileTBtrans method)
(sisl.io.tbtrans.phtncSileTBtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
atom_COOP_from_orbital() (sisl.io.tbtrans.phtavncSileTBtrans method)
(sisl.io.tbtrans.phtncSileTBtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
atom_current() (sisl.io.tbtrans.phtavncSileTBtrans method)
(sisl.io.tbtrans.phtncSileTBtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
atom_current_from_orbital() (sisl.io.tbtrans.phtavncSileTBtrans method)
(sisl.io.tbtrans.phtncSileTBtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
atomic_mass() (sisl.PeriodicTable method)
AtomicOrbital (class in sisl)
Atoms (class in sisl)
atoms (sisl.Geometry attribute)
attach() (sisl.Geometry method)
average() (sisl.Grid method)
axyz() (sisl.Geometry method)
B
bandsSileSiesta (class in sisl.io.siesta)
BandStructure (class in sisl.physics)
(class in sisl.physics.brillouinzone)
base_file (sisl.io.BaseSile attribute)
(sisl.io.Sile attribute)
(sisl.io.SileBin attribute)
(sisl.io.SileCDF attribute)
(sisl.io.bigdft.asciiSileBigDFT attribute)
(sisl.io.cube.cubeSile attribute)
(sisl.io.gulp.fcSileGULP attribute)
(sisl.io.gulp.gotSileGULP attribute)
(sisl.io.molden.moldenSile attribute)
(sisl.io.openmx.omxSileOpenMX attribute)
(sisl.io.pdb.pdbSile attribute)
(sisl.io.scaleup.orboccSileScaleUp attribute)
(sisl.io.scaleup.refSileScaleUp attribute)
(sisl.io.scaleup.rhamSileScaleUp attribute)
(sisl.io.siesta.bandsSileSiesta attribute)
(sisl.io.siesta.dmSileSiesta attribute)
(sisl.io.siesta.eigSileSiesta attribute)
(sisl.io.siesta.faSileSiesta attribute)
(sisl.io.siesta.fcSileSiesta attribute)
(sisl.io.siesta.fdfSileSiesta attribute)
(sisl.io.siesta.gridSileSiesta attribute)
(sisl.io.siesta.gridncSileSiesta attribute)
(sisl.io.siesta.hsxSileSiesta attribute)
(sisl.io.siesta.ionncSileSiesta attribute)
(sisl.io.siesta.ionxmlSileSiesta attribute)
(sisl.io.siesta.kpSileSiesta attribute)
(sisl.io.siesta.ncSileSiesta attribute)
(sisl.io.siesta.orbindxSileSiesta attribute)
(sisl.io.siesta.outSileSiesta attribute)
(sisl.io.siesta.pdosSileSiesta attribute)
(sisl.io.siesta.rkpSileSiesta attribute)
(sisl.io.siesta.tsdeSileSiesta attribute)
(sisl.io.siesta.tsgfSileSiesta attribute)
(sisl.io.siesta.tshsSileSiesta attribute)
(sisl.io.siesta.tsvncSileSiesta attribute)
(sisl.io.siesta.xvSileSiesta attribute)
(sisl.io.table.tableSile attribute)
(sisl.io.tbtrans.deltancSileTBtrans attribute)
(sisl.io.tbtrans.dhncSileTBtrans attribute)
(sisl.io.tbtrans.phtavncSileTBtrans attribute)
(sisl.io.tbtrans.phtncSileTBtrans attribute)
(sisl.io.tbtrans.phtsencSileTBtrans attribute)
(sisl.io.tbtrans.tbtavncSileTBtrans attribute)
(sisl.io.tbtrans.tbtgfSileTBtrans attribute)
(sisl.io.tbtrans.tbtncSileTBtrans attribute)
(sisl.io.tbtrans.tbtsencSileTBtrans attribute)
(sisl.io.vasp.carSileVASP attribute)
(sisl.io.vasp.contcarSileVASP attribute)
(sisl.io.vasp.doscarSileVASP attribute)
(sisl.io.vasp.eigenvalSileVASP attribute)
(sisl.io.vasp.poscarSileVASP attribute)
(sisl.io.wannier90.winSileWannier90 attribute)
(sisl.io.xsf.xsfSile attribute)
(sisl.io.xyz.xyzSile attribute)
BaseSile (class in sisl.io)
bcc() (in module sisl.geom)
BDOS() (sisl.io.tbtrans.phtavncSileTBtrans method)
(sisl.io.tbtrans.phtncSileTBtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
berry_phase() (in module sisl.physics.electron)
best (sisl.Selector attribute)
bond_correct() (sisl.Geometry method)
bond_current() (sisl.io.tbtrans.phtavncSileTBtrans method)
(sisl.io.tbtrans.phtncSileTBtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
bond_current_from_orbital() (sisl.io.tbtrans.phtavncSileTBtrans method)
(sisl.io.tbtrans.phtncSileTBtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
bose_einstein() (in module sisl.physics)
(in module sisl.physics.distribution)
BrillouinZone (class in sisl.physics)
(class in sisl.physics.brillouinzone)
btd() (sisl.io.tbtrans.phtavncSileTBtrans method)
(sisl.io.tbtrans.phtncSileTBtrans method)
(sisl.io.tbtrans.phtsencSileTBtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
(sisl.io.tbtrans.tbtsencSileTBtrans method)
C
c (in module sisl.constant)
(sisl.physics.Coefficient attribute)
(sisl.physics.EigenmodePhonon attribute)
(sisl.physics.EigenstateElectron attribute)
(sisl.physics.EigenvalueElectron attribute)
(sisl.physics.EigenvaluePhonon attribute)
(sisl.physics.StateC attribute)
(sisl.physics.electron.CoefficientElectron attribute)
(sisl.physics.electron.EigenstateElectron attribute)
(sisl.physics.electron.EigenvalueElectron attribute)
(sisl.physics.electron.StateCElectron attribute)
(sisl.physics.phonon.CoefficientPhonon attribute)
(sisl.physics.phonon.EigenmodePhonon attribute)
(sisl.physics.phonon.EigenvaluePhonon attribute)
(sisl.physics.phonon.ModeCPhonon attribute)
carSileVASP (class in sisl.io.vasp)
cell (sisl.Geometry attribute)
(sisl.Grid attribute)
(sisl.SuperCell attribute)
(sisl.io.tbtrans.phtavncSileTBtrans attribute)
(sisl.io.tbtrans.phtncSileTBtrans attribute)
(sisl.io.tbtrans.phtsencSileTBtrans attribute)
(sisl.io.tbtrans.tbtavncSileTBtrans attribute)
(sisl.io.tbtrans.tbtncSileTBtrans attribute)
(sisl.io.tbtrans.tbtsencSileTBtrans attribute)
(sisl.physics.BandStructure attribute)
(sisl.physics.BrillouinZone attribute)
(sisl.physics.MonkhorstPack attribute)
(sisl.physics.brillouinzone.BandStructure attribute)
(sisl.physics.brillouinzone.BrillouinZone attribute)
(sisl.physics.brillouinzone.MonkhorstPack attribute)
center (sisl.shape.Cube attribute)
(sisl.shape.Cuboid attribute)
(sisl.shape.Ellipsoid attribute)
(sisl.shape.NullShape attribute)
(sisl.shape.Shape attribute)
(sisl.shape.Sphere attribute)
center() (sisl.Geometry method)
(sisl.SuperCell method)
change_gauge() (sisl.physics.EigenmodePhonon method)
(sisl.physics.EigenstateElectron method)
(sisl.physics.EigenvectorElectron method)
(sisl.physics.EigenvectorPhonon method)
(sisl.physics.electron.EigenstateElectron method)
(sisl.physics.electron.EigenvectorElectron method)
(sisl.physics.electron.StateCElectron method)
(sisl.physics.electron.StateElectron method)
(sisl.physics.phonon.EigenmodePhonon method)
(sisl.physics.phonon.EigenvectorPhonon method)
(sisl.physics.phonon.ModeCPhonon method)
(sisl.physics.phonon.ModePhonon method)
characters_written (sisl.io.SileError attribute)
charge() (sisl.physics.DensityMatrix method)
chemical_potential() (sisl.io.tbtrans.phtavncSileTBtrans method)
(sisl.io.tbtrans.phtncSileTBtrans method)
(sisl.io.tbtrans.phtsencSileTBtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
(sisl.io.tbtrans.tbtsencSileTBtrans method)
close() (sisl.Geometry method)
(sisl.io.SileCDF method)
(sisl.io.siesta.gridncSileSiesta method)
(sisl.io.siesta.ionncSileSiesta method)
(sisl.io.siesta.ncSileSiesta method)
(sisl.io.siesta.tsvncSileSiesta method)
(sisl.io.tbtrans.deltancSileTBtrans method)
(sisl.io.tbtrans.dhncSileTBtrans method)
(sisl.io.tbtrans.phtavncSileTBtrans method)
(sisl.io.tbtrans.phtncSileTBtrans method)
(sisl.io.tbtrans.phtsencSileTBtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
(sisl.io.tbtrans.tbtsencSileTBtrans method)
close_all() (sisl.Geometry method)
close_sc() (sisl.Geometry method)
Coefficient (class in sisl.physics)
CoefficientElectron (class in sisl.physics.electron)
CoefficientPhonon (class in sisl.physics.phonon)
cold() (in module sisl.physics)
(in module sisl.physics.distribution)
conj() (sisl.Quaternion method)
conjugate() (sisl.constant.PhysicalConstant method)
construct() (sisl.physics.DensityMatrix method)
(sisl.SparseAtom method)
(sisl.SparseOrbital method)
(sisl.physics.DynamicalMatrix method)
(sisl.physics.EnergyDensityMatrix method)
(sisl.physics.Hamiltonian method)
(sisl.physics.SparseOrbitalBZ method)
(sisl.physics.SparseOrbitalBZSpin method)
contcarSileVASP (class in sisl.io.vasp)
copy() (sisl.Atom method)
(sisl.AtomicOrbital method)
(sisl.Atoms method)
(sisl.Geometry method)
(sisl.Grid method)
(sisl.Orbital method)
(sisl.Quaternion method)
(sisl.SparseAtom method)
(sisl.SparseCSR method)
(sisl.SparseOrbital method)
(sisl.SphericalOrbital method)
(sisl.SuperCell method)
(sisl.physics.BandStructure method)
(sisl.physics.BrillouinZone method)
(sisl.physics.Coefficient method)
(sisl.physics.DensityMatrix method)
(sisl.physics.DynamicalMatrix method)
(sisl.physics.EigenmodePhonon method)
(sisl.physics.EigenstateElectron method)
(sisl.physics.EigenvalueElectron method)
(sisl.physics.EigenvaluePhonon method)
(sisl.physics.EigenvectorElectron method)
(sisl.physics.EigenvectorPhonon method)
(sisl.physics.EnergyDensityMatrix method)
(sisl.physics.Hamiltonian method)
(sisl.physics.MonkhorstPack method)
(sisl.physics.SparseOrbitalBZ method)
(sisl.physics.SparseOrbitalBZSpin method)
(sisl.physics.Spin method)
(sisl.physics.State method)
(sisl.physics.StateC method)
(sisl.physics.brillouinzone.BandStructure method)
(sisl.physics.brillouinzone.BrillouinZone method)
(sisl.physics.brillouinzone.MonkhorstPack method)
(sisl.physics.electron.CoefficientElectron method)
(sisl.physics.electron.EigenstateElectron method)
(sisl.physics.electron.EigenvalueElectron method)
(sisl.physics.electron.EigenvectorElectron method)
(sisl.physics.electron.StateCElectron method)
(sisl.physics.electron.StateElectron method)
(sisl.physics.phonon.CoefficientPhonon method)
(sisl.physics.phonon.EigenmodePhonon method)
(sisl.physics.phonon.EigenvaluePhonon method)
(sisl.physics.phonon.EigenvectorPhonon method)
(sisl.physics.phonon.ModeCPhonon method)
(sisl.physics.phonon.ModePhonon method)
(sisl.shape.Cube method)
(sisl.shape.Cuboid method)
(sisl.shape.Ellipsoid method)
(sisl.shape.Sphere method)
create_construct() (sisl.physics.DensityMatrix method)
(sisl.SparseAtom method)
(sisl.SparseOrbital method)
(sisl.physics.DynamicalMatrix method)
(sisl.physics.EnergyDensityMatrix method)
(sisl.physics.Hamiltonian method)
(sisl.physics.SparseOrbitalBZ method)
(sisl.physics.SparseOrbitalBZSpin method)
cross_section() (sisl.Grid method)
Cube (class in sisl.shape)
cubeSile (class in sisl.io.cube)
Cuboid (class in sisl.shape)
current() (sisl.io.tbtrans.phtavncSileTBtrans method)
(sisl.io.tbtrans.phtncSileTBtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
current_parameter() (sisl.io.tbtrans.phtavncSileTBtrans method)
(sisl.io.tbtrans.phtncSileTBtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
cut() (sisl.Geometry method)
(sisl.SparseAtom method)
(sisl.SparseOrbital method)
(sisl.SuperCell method)
(sisl.physics.DensityMatrix method)
(sisl.physics.DynamicalMatrix method)
(sisl.physics.EnergyDensityMatrix method)
(sisl.physics.Hamiltonian method)
(sisl.physics.SparseOrbitalBZ method)
(sisl.physics.SparseOrbitalBZSpin method)
D
D (sisl.physics.DensityMatrix attribute)
(sisl.physics.DynamicalMatrix attribute)
data (sisl.SparseCSR attribute)
dcell (sisl.Grid attribute)
ddDk() (sisl.physics.DensityMatrix method)
(sisl.physics.DynamicalMatrix method)
ddEk() (sisl.physics.EnergyDensityMatrix method)
ddHk() (sisl.physics.Hamiltonian method)
dDk() (sisl.physics.DensityMatrix method)
(sisl.physics.DynamicalMatrix method)
ddSk() (sisl.physics.DensityMatrix method)
(sisl.physics.DynamicalMatrix method)
(sisl.physics.EnergyDensityMatrix method)
(sisl.physics.Hamiltonian method)
(sisl.physics.SparseOrbitalBZ method)
(sisl.physics.SparseOrbitalBZSpin method)
degenerate() (sisl.physics.Coefficient method)
(sisl.physics.EigenmodePhonon method)
(sisl.physics.EigenstateElectron method)
(sisl.physics.EigenvalueElectron method)
(sisl.physics.EigenvaluePhonon method)
(sisl.physics.StateC method)
(sisl.physics.electron.CoefficientElectron method)
(sisl.physics.electron.EigenstateElectron method)
(sisl.physics.electron.EigenvalueElectron method)
(sisl.physics.electron.StateCElectron method)
(sisl.physics.phonon.CoefficientPhonon method)
(sisl.physics.phonon.EigenmodePhonon method)
(sisl.physics.phonon.EigenvaluePhonon method)
(sisl.physics.phonon.ModeCPhonon method)
degree (sisl.Quaternion attribute)
dEk() (sisl.physics.EnergyDensityMatrix method)
delete_columns() (sisl.SparseCSR method)
deltancSileTBtrans (class in sisl.io.tbtrans)
density() (sisl.physics.DensityMatrix method)
(sisl.physics.EnergyDensityMatrix method)
density_matrix() (sisl.io.tbtrans.phtavncSileTBtrans method)
(sisl.io.tbtrans.phtncSileTBtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
DensityMatrix (class in sisl.physics)
dHk() (sisl.physics.Hamiltonian method)
dhncSileTBtrans (class in sisl.io.tbtrans)
diags() (sisl.SparseCSR method)
diamond() (in module sisl.geom)
dim (sisl.physics.DensityMatrix attribute)
(sisl.SparseAtom attribute)
(sisl.SparseCSR attribute)
(sisl.SparseOrbital attribute)
(sisl.physics.DynamicalMatrix attribute)
(sisl.physics.EnergyDensityMatrix attribute)
(sisl.physics.Hamiltonian attribute)
(sisl.physics.SparseOrbitalBZ attribute)
(sisl.physics.SparseOrbitalBZSpin attribute)
dir_file() (sisl.io.BaseSile method)
(sisl.io.Sile method)
(sisl.io.SileBin method)
(sisl.io.SileCDF method)
(sisl.io.bigdft.asciiSileBigDFT method)
(sisl.io.cube.cubeSile method)
(sisl.io.gulp.fcSileGULP method)
(sisl.io.gulp.gotSileGULP method)
(sisl.io.molden.moldenSile method)
(sisl.io.openmx.omxSileOpenMX method)
(sisl.io.pdb.pdbSile method)
(sisl.io.scaleup.orboccSileScaleUp method)
(sisl.io.scaleup.refSileScaleUp method)
(sisl.io.scaleup.rhamSileScaleUp method)
(sisl.io.siesta.bandsSileSiesta method)
(sisl.io.siesta.dmSileSiesta method)
(sisl.io.siesta.eigSileSiesta method)
(sisl.io.siesta.faSileSiesta method)
(sisl.io.siesta.fcSileSiesta method)
(sisl.io.siesta.fdfSileSiesta method)
(sisl.io.siesta.gridSileSiesta method)
(sisl.io.siesta.gridncSileSiesta method)
(sisl.io.siesta.hsxSileSiesta method)
(sisl.io.siesta.ionncSileSiesta method)
(sisl.io.siesta.ionxmlSileSiesta method)
(sisl.io.siesta.kpSileSiesta method)
(sisl.io.siesta.ncSileSiesta method)
(sisl.io.siesta.orbindxSileSiesta method)
(sisl.io.siesta.outSileSiesta method)
(sisl.io.siesta.pdosSileSiesta method)
(sisl.io.siesta.rkpSileSiesta method)
(sisl.io.siesta.tsdeSileSiesta method)
(sisl.io.siesta.tsgfSileSiesta method)
(sisl.io.siesta.tshsSileSiesta method)
(sisl.io.siesta.tsvncSileSiesta method)
(sisl.io.siesta.xvSileSiesta method)
(sisl.io.table.tableSile method)
(sisl.io.tbtrans.deltancSileTBtrans method)
(sisl.io.tbtrans.dhncSileTBtrans method)
(sisl.io.tbtrans.phtavncSileTBtrans method)
(sisl.io.tbtrans.phtncSileTBtrans method)
(sisl.io.tbtrans.phtsencSileTBtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtgfSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
(sisl.io.tbtrans.tbtsencSileTBtrans method)
(sisl.io.vasp.carSileVASP method)
(sisl.io.vasp.contcarSileVASP method)
(sisl.io.vasp.doscarSileVASP method)
(sisl.io.vasp.eigenvalSileVASP method)
(sisl.io.vasp.poscarSileVASP method)
(sisl.io.wannier90.winSileWannier90 method)
(sisl.io.xsf.xsfSile method)
(sisl.io.xyz.xyzSile method)
direction() (in module sisl.utils)
DIRICHLET (sisl.Grid attribute)
displacement() (in module sisl.physics.phonon)
(sisl.physics.DynamicalMatrix method)
(sisl.physics.EigenmodePhonon method)
(sisl.physics.phonon.EigenmodePhonon method)
distance() (sisl.Geometry method)
Dk() (sisl.physics.DensityMatrix method)
(sisl.physics.DynamicalMatrix method)
dkind (sisl.Grid attribute)
(sisl.SparseAtom attribute)
(sisl.SparseCSR attribute)
(sisl.SparseOrbital attribute)
(sisl.physics.Coefficient attribute)
(sisl.physics.DensityMatrix attribute)
(sisl.physics.DynamicalMatrix attribute)
(sisl.physics.EigenmodePhonon attribute)
(sisl.physics.EigenstateElectron attribute)
(sisl.physics.EigenvalueElectron attribute)
(sisl.physics.EigenvaluePhonon attribute)
(sisl.physics.EigenvectorElectron attribute)
(sisl.physics.EigenvectorPhonon attribute)
(sisl.physics.EnergyDensityMatrix attribute)
(sisl.physics.Hamiltonian attribute)
(sisl.physics.SparseOrbitalBZ attribute)
(sisl.physics.SparseOrbitalBZSpin attribute)
(sisl.physics.Spin attribute)
(sisl.physics.State attribute)
(sisl.physics.StateC attribute)
(sisl.physics.electron.CoefficientElectron attribute)
(sisl.physics.electron.EigenstateElectron attribute)
(sisl.physics.electron.EigenvalueElectron attribute)
(sisl.physics.electron.EigenvectorElectron attribute)
(sisl.physics.electron.StateCElectron attribute)
(sisl.physics.electron.StateElectron attribute)
(sisl.physics.phonon.CoefficientPhonon attribute)
(sisl.physics.phonon.EigenmodePhonon attribute)
(sisl.physics.phonon.EigenvaluePhonon attribute)
(sisl.physics.phonon.EigenvectorPhonon attribute)
(sisl.physics.phonon.ModeCPhonon attribute)
(sisl.physics.phonon.ModePhonon attribute)
dmSileSiesta (class in sisl.io.siesta)
DOS() (in module sisl.physics.electron)
(in module sisl.physics.phonon)
(sisl.io.tbtrans.phtavncSileTBtrans method)
(sisl.io.tbtrans.phtncSileTBtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
(sisl.physics.DynamicalMatrix method)
(sisl.physics.EigenmodePhonon method)
(sisl.physics.EigenstateElectron method)
(sisl.physics.EigenvalueElectron method)
(sisl.physics.EigenvaluePhonon method)
(sisl.physics.Hamiltonian method)
(sisl.physics.electron.EigenstateElectron method)
(sisl.physics.electron.EigenvalueElectron method)
(sisl.physics.phonon.EigenmodePhonon method)
(sisl.physics.phonon.EigenvaluePhonon method)
doscarSileVASP (class in sisl.io.vasp)
dSk() (sisl.physics.DensityMatrix method)
(sisl.physics.DynamicalMatrix method)
(sisl.physics.EnergyDensityMatrix method)
(sisl.physics.Hamiltonian method)
(sisl.physics.SparseOrbitalBZ method)
(sisl.physics.SparseOrbitalBZSpin method)
dtype (sisl.Grid attribute)
(sisl.SparseAtom attribute)
(sisl.SparseCSR attribute)
(sisl.SparseOrbital attribute)
(sisl.physics.Coefficient attribute)
(sisl.physics.DensityMatrix attribute)
(sisl.physics.DynamicalMatrix attribute)
(sisl.physics.EigenmodePhonon attribute)
(sisl.physics.EigenstateElectron attribute)
(sisl.physics.EigenvalueElectron attribute)
(sisl.physics.EigenvaluePhonon attribute)
(sisl.physics.EigenvectorElectron attribute)
(sisl.physics.EigenvectorPhonon attribute)
(sisl.physics.EnergyDensityMatrix attribute)
(sisl.physics.Hamiltonian attribute)
(sisl.physics.SparseOrbitalBZ attribute)
(sisl.physics.SparseOrbitalBZSpin attribute)
(sisl.physics.Spin attribute)
(sisl.physics.State attribute)
(sisl.physics.StateC attribute)
(sisl.physics.electron.CoefficientElectron attribute)
(sisl.physics.electron.EigenstateElectron attribute)
(sisl.physics.electron.EigenvalueElectron attribute)
(sisl.physics.electron.EigenvectorElectron attribute)
(sisl.physics.electron.StateCElectron attribute)
(sisl.physics.electron.StateElectron attribute)
(sisl.physics.phonon.CoefficientPhonon attribute)
(sisl.physics.phonon.EigenmodePhonon attribute)
(sisl.physics.phonon.EigenvaluePhonon attribute)
(sisl.physics.phonon.EigenvectorPhonon attribute)
(sisl.physics.phonon.ModeCPhonon attribute)
(sisl.physics.phonon.ModePhonon attribute)
dvolume (sisl.Grid attribute)
DynamicalMatrix (class in sisl.physics)
E
E (sisl.io.tbtrans.phtavncSileTBtrans attribute)
(sisl.io.tbtrans.phtncSileTBtrans attribute)
(sisl.io.tbtrans.phtsencSileTBtrans attribute)
(sisl.io.tbtrans.tbtavncSileTBtrans attribute)
(sisl.io.tbtrans.tbtncSileTBtrans attribute)
(sisl.io.tbtrans.tbtsencSileTBtrans attribute)
(sisl.physics.EnergyDensityMatrix attribute)
edge_length (sisl.shape.Cube attribute)
(sisl.shape.Cuboid attribute)
edges() (sisl.physics.DensityMatrix method)
(sisl.SparseAtom method)
(sisl.SparseCSR method)
(sisl.SparseOrbital method)
(sisl.physics.DynamicalMatrix method)
(sisl.physics.EnergyDensityMatrix method)
(sisl.physics.Hamiltonian method)
(sisl.physics.SparseOrbitalBZ method)
(sisl.physics.SparseOrbitalBZSpin method)
eig (sisl.physics.EigenstateElectron attribute)
(sisl.physics.EigenvalueElectron attribute)
(sisl.physics.electron.EigenstateElectron attribute)
(sisl.physics.electron.EigenvalueElectron attribute)
eig() (sisl.physics.DensityMatrix method)
(sisl.physics.DynamicalMatrix method)
(sisl.physics.EnergyDensityMatrix method)
(sisl.physics.Hamiltonian method)
(sisl.physics.SparseOrbitalBZ method)
(sisl.physics.SparseOrbitalBZSpin method)
eigenmode() (sisl.physics.DynamicalMatrix method)
EigenmodePhonon (class in sisl.physics)
(class in sisl.physics.phonon)
eigenstate() (sisl.physics.Hamiltonian method)
EigenstateElectron (class in sisl.physics)
(class in sisl.physics.electron)
eigenvalSileVASP (class in sisl.io.vasp)
eigenvalue() (sisl.physics.DynamicalMatrix method)
(sisl.physics.Hamiltonian method)
EigenvalueElectron (class in sisl.physics)
(class in sisl.physics.electron)
EigenvaluePhonon (class in sisl.physics)
(class in sisl.physics.phonon)
EigenvectorElectron (class in sisl.physics)
(class in sisl.physics.electron)
EigenvectorPhonon (class in sisl.physics)
(class in sisl.physics.phonon)
eigh() (sisl.physics.DensityMatrix method)
(sisl.physics.DynamicalMatrix method)
(sisl.physics.EnergyDensityMatrix method)
(sisl.physics.Hamiltonian method)
(sisl.physics.SparseOrbitalBZ method)
(sisl.physics.SparseOrbitalBZSpin method)
eigsh() (sisl.physics.DensityMatrix method)
(sisl.physics.DynamicalMatrix method)
(sisl.physics.EnergyDensityMatrix method)
(sisl.physics.Hamiltonian method)
(sisl.physics.SparseOrbitalBZ method)
(sisl.physics.SparseOrbitalBZSpin method)
eigSileSiesta (class in sisl.io.siesta)
Eindex() (sisl.io.tbtrans.phtavncSileTBtrans method)
(sisl.io.tbtrans.phtncSileTBtrans method)
(sisl.io.tbtrans.phtsencSileTBtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
(sisl.io.tbtrans.tbtsencSileTBtrans method)
Ek() (sisl.physics.EnergyDensityMatrix method)
elecs (sisl.io.tbtrans.phtavncSileTBtrans attribute)
(sisl.io.tbtrans.phtncSileTBtrans attribute)
(sisl.io.tbtrans.phtsencSileTBtrans attribute)
(sisl.io.tbtrans.tbtavncSileTBtrans attribute)
(sisl.io.tbtrans.tbtncSileTBtrans attribute)
(sisl.io.tbtrans.tbtsencSileTBtrans attribute)
electronic_temperature() (sisl.io.tbtrans.phtavncSileTBtrans method)
(sisl.io.tbtrans.phtncSileTBtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
eliminate_zeros() (sisl.physics.DensityMatrix method)
(sisl.SparseAtom method)
(sisl.SparseCSR method)
(sisl.SparseOrbital method)
(sisl.physics.DynamicalMatrix method)
(sisl.physics.EnergyDensityMatrix method)
(sisl.physics.Hamiltonian method)
(sisl.physics.SparseOrbitalBZ method)
(sisl.physics.SparseOrbitalBZSpin method)
Ellipsoid (class in sisl.shape)
empty() (sisl.physics.DensityMatrix method)
(sisl.SparseAtom method)
(sisl.SparseCSR method)
(sisl.SparseOrbital method)
(sisl.physics.DynamicalMatrix method)
(sisl.physics.EnergyDensityMatrix method)
(sisl.physics.Hamiltonian method)
(sisl.physics.SparseOrbitalBZ method)
(sisl.physics.SparseOrbitalBZSpin method)
energy_charge() (sisl.physics.EnergyDensityMatrix method)
EnergyDensityMatrix (class in sisl.physics)
equal() (sisl.Atom method)
(sisl.AtomicOrbital method)
(sisl.Atoms method)
(sisl.Geometry method)
(sisl.Orbital method)
(sisl.SphericalOrbital method)
(sisl.SuperCell method)
erange() (in module sisl.utils)
errno (sisl.io.SileError attribute)
eta() (sisl.io.tbtrans.phtavncSileTBtrans method)
(sisl.io.tbtrans.phtncSileTBtrans method)
(sisl.io.tbtrans.phtsencSileTBtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
(sisl.io.tbtrans.tbtsencSileTBtrans method)
exist() (sisl.io.BaseSile method)
(sisl.io.Sile method)
(sisl.io.SileBin method)
(sisl.io.SileCDF method)
(sisl.io.bigdft.asciiSileBigDFT method)
(sisl.io.cube.cubeSile method)
(sisl.io.gulp.fcSileGULP method)
(sisl.io.gulp.gotSileGULP method)
(sisl.io.molden.moldenSile method)
(sisl.io.openmx.omxSileOpenMX method)
(sisl.io.pdb.pdbSile method)
(sisl.io.scaleup.orboccSileScaleUp method)
(sisl.io.scaleup.refSileScaleUp method)
(sisl.io.scaleup.rhamSileScaleUp method)
(sisl.io.siesta.bandsSileSiesta method)
(sisl.io.siesta.dmSileSiesta method)
(sisl.io.siesta.eigSileSiesta method)
(sisl.io.siesta.faSileSiesta method)
(sisl.io.siesta.fcSileSiesta method)
(sisl.io.siesta.fdfSileSiesta method)
(sisl.io.siesta.gridSileSiesta method)
(sisl.io.siesta.gridncSileSiesta method)
(sisl.io.siesta.hsxSileSiesta method)
(sisl.io.siesta.ionncSileSiesta method)
(sisl.io.siesta.ionxmlSileSiesta method)
(sisl.io.siesta.kpSileSiesta method)
(sisl.io.siesta.ncSileSiesta method)
(sisl.io.siesta.orbindxSileSiesta method)
(sisl.io.siesta.outSileSiesta method)
(sisl.io.siesta.pdosSileSiesta method)
(sisl.io.siesta.rkpSileSiesta method)
(sisl.io.siesta.tsdeSileSiesta method)
(sisl.io.siesta.tsgfSileSiesta method)
(sisl.io.siesta.tshsSileSiesta method)
(sisl.io.siesta.tsvncSileSiesta method)
(sisl.io.siesta.xvSileSiesta method)
(sisl.io.table.tableSile method)
(sisl.io.tbtrans.deltancSileTBtrans method)
(sisl.io.tbtrans.dhncSileTBtrans method)
(sisl.io.tbtrans.phtavncSileTBtrans method)
(sisl.io.tbtrans.phtncSileTBtrans method)
(sisl.io.tbtrans.phtsencSileTBtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtgfSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
(sisl.io.tbtrans.tbtsencSileTBtrans method)
(sisl.io.vasp.carSileVASP method)
(sisl.io.vasp.contcarSileVASP method)
(sisl.io.vasp.doscarSileVASP method)
(sisl.io.vasp.eigenvalSileVASP method)
(sisl.io.vasp.poscarSileVASP method)
(sisl.io.wannier90.winSileWannier90 method)
(sisl.io.xsf.xsfSile method)
(sisl.io.xyz.xyzSile method)
expand() (sisl.shape.Cube method)
(sisl.shape.Cuboid method)
(sisl.shape.Ellipsoid method)
(sisl.shape.NullShape method)
(sisl.shape.Sphere method)
expectation() (sisl.physics.EigenstateElectron method)
(sisl.physics.EigenvectorElectron method)
(sisl.physics.electron.EigenstateElectron method)
(sisl.physics.electron.EigenvectorElectron method)
(sisl.physics.electron.StateCElectron method)
(sisl.physics.electron.StateElectron method)
F
f (sisl.AtomicOrbital attribute)
(sisl.SphericalOrbital attribute)
fano() (sisl.io.tbtrans.phtavncSileTBtrans method)
(sisl.io.tbtrans.phtncSileTBtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
faSileSiesta (class in sisl.io.siesta)
fcc() (in module sisl.geom)
fcSileGULP (class in sisl.io.gulp)
fcSileSiesta (class in sisl.io.siesta)
fdfSileSiesta (class in sisl.io.siesta)
fermi_dirac() (in module sisl.physics)
(in module sisl.physics.distribution)
fermi_level() (sisl.physics.Hamiltonian method)
file (sisl.io.BaseSile attribute)
(sisl.io.Sile attribute)
(sisl.io.SileBin attribute)
(sisl.io.SileCDF attribute)
(sisl.io.bigdft.asciiSileBigDFT attribute)
(sisl.io.cube.cubeSile attribute)
(sisl.io.gulp.fcSileGULP attribute)
(sisl.io.gulp.gotSileGULP attribute)
(sisl.io.molden.moldenSile attribute)
(sisl.io.openmx.omxSileOpenMX attribute)
(sisl.io.pdb.pdbSile attribute)
(sisl.io.scaleup.orboccSileScaleUp attribute)
(sisl.io.scaleup.refSileScaleUp attribute)
(sisl.io.scaleup.rhamSileScaleUp attribute)
(sisl.io.siesta.bandsSileSiesta attribute)
(sisl.io.siesta.dmSileSiesta attribute)
(sisl.io.siesta.eigSileSiesta attribute)
(sisl.io.siesta.faSileSiesta attribute)
(sisl.io.siesta.fcSileSiesta attribute)
(sisl.io.siesta.fdfSileSiesta attribute)
(sisl.io.siesta.gridSileSiesta attribute)
(sisl.io.siesta.gridncSileSiesta attribute)
(sisl.io.siesta.hsxSileSiesta attribute)
(sisl.io.siesta.ionncSileSiesta attribute)
(sisl.io.siesta.ionxmlSileSiesta attribute)
(sisl.io.siesta.kpSileSiesta attribute)
(sisl.io.siesta.ncSileSiesta attribute)
(sisl.io.siesta.orbindxSileSiesta attribute)
(sisl.io.siesta.outSileSiesta attribute)
(sisl.io.siesta.pdosSileSiesta attribute)
(sisl.io.siesta.rkpSileSiesta attribute)
(sisl.io.siesta.tsdeSileSiesta attribute)
(sisl.io.siesta.tsgfSileSiesta attribute)
(sisl.io.siesta.tshsSileSiesta attribute)
(sisl.io.siesta.tsvncSileSiesta attribute)
(sisl.io.siesta.xvSileSiesta attribute)
(sisl.io.table.tableSile attribute)
(sisl.io.tbtrans.deltancSileTBtrans attribute)
(sisl.io.tbtrans.dhncSileTBtrans attribute)
(sisl.io.tbtrans.phtavncSileTBtrans attribute)
(sisl.io.tbtrans.phtncSileTBtrans attribute)
(sisl.io.tbtrans.phtsencSileTBtrans attribute)
(sisl.io.tbtrans.tbtavncSileTBtrans attribute)
(sisl.io.tbtrans.tbtgfSileTBtrans attribute)
(sisl.io.tbtrans.tbtncSileTBtrans attribute)
(sisl.io.tbtrans.tbtsencSileTBtrans attribute)
(sisl.io.vasp.carSileVASP attribute)
(sisl.io.vasp.contcarSileVASP attribute)
(sisl.io.vasp.doscarSileVASP attribute)
(sisl.io.vasp.eigenvalSileVASP attribute)
(sisl.io.vasp.poscarSileVASP attribute)
(sisl.io.wannier90.winSileWannier90 attribute)
(sisl.io.xsf.xsfSile attribute)
(sisl.io.xyz.xyzSile attribute)
fileindex() (in module sisl.utils)
filename (sisl.io.SileError attribute)
filename2 (sisl.io.SileError attribute)
fill() (sisl.Grid method)
finalize() (sisl.physics.DensityMatrix method)
(sisl.SparseAtom method)
(sisl.SparseCSR method)
(sisl.SparseOrbital method)
(sisl.physics.DynamicalMatrix method)
(sisl.physics.EnergyDensityMatrix method)
(sisl.physics.Hamiltonian method)
(sisl.physics.SparseOrbitalBZ method)
(sisl.physics.SparseOrbitalBZSpin method)
finalized (sisl.physics.DensityMatrix attribute)
(sisl.SparseAtom attribute)
(sisl.SparseCSR attribute)
(sisl.SparseOrbital attribute)
(sisl.physics.DynamicalMatrix attribute)
(sisl.physics.EnergyDensityMatrix attribute)
(sisl.physics.Hamiltonian attribute)
(sisl.physics.SparseOrbitalBZ attribute)
(sisl.physics.SparseOrbitalBZSpin attribute)
firsto (sisl.Atoms attribute)
(sisl.Geometry attribute)
fit() (sisl.SuperCell method)
fromASE() (sisl.Geometry class method)
fromhex() (sisl.constant.PhysicalConstant method)
fromsp() (sisl.physics.DensityMatrix class method)
(sisl.SparseAtom class method)
(sisl.SparseOrbital class method)
(sisl.physics.DynamicalMatrix class method)
(sisl.physics.EnergyDensityMatrix class method)
(sisl.physics.Hamiltonian class method)
(sisl.physics.SparseOrbitalBZ class method)
(sisl.physics.SparseOrbitalBZSpin class method)
fxyz (sisl.Geometry attribute)
G
G (in module sisl.constant)
gaussian() (in module sisl.physics)
(in module sisl.physics.distribution)
geom (sisl.Grid attribute)
(sisl.SparseAtom attribute)
(sisl.SparseOrbital attribute)
(sisl.io.tbtrans.phtavncSileTBtrans attribute)
(sisl.io.tbtrans.phtncSileTBtrans attribute)
(sisl.io.tbtrans.phtsencSileTBtrans attribute)
(sisl.io.tbtrans.tbtavncSileTBtrans attribute)
(sisl.io.tbtrans.tbtncSileTBtrans attribute)
(sisl.io.tbtrans.tbtsencSileTBtrans attribute)
(sisl.physics.DensityMatrix attribute)
(sisl.physics.DynamicalMatrix attribute)
(sisl.physics.EnergyDensityMatrix attribute)
(sisl.physics.Hamiltonian attribute)
(sisl.physics.SparseOrbitalBZ attribute)
(sisl.physics.SparseOrbitalBZSpin attribute)
Geometry (class in sisl)
geometry (sisl.io.tbtrans.phtavncSileTBtrans attribute)
(sisl.SparseAtom attribute)
(sisl.SparseOrbital attribute)
(sisl.io.tbtrans.phtncSileTBtrans attribute)
(sisl.io.tbtrans.phtsencSileTBtrans attribute)
(sisl.io.tbtrans.tbtavncSileTBtrans attribute)
(sisl.io.tbtrans.tbtncSileTBtrans attribute)
(sisl.io.tbtrans.tbtsencSileTBtrans attribute)
(sisl.physics.DensityMatrix attribute)
(sisl.physics.DynamicalMatrix attribute)
(sisl.physics.EnergyDensityMatrix attribute)
(sisl.physics.Hamiltonian attribute)
(sisl.physics.SparseOrbitalBZ attribute)
(sisl.physics.SparseOrbitalBZSpin attribute)
get() (sisl.io.openmx.omxSileOpenMX method)
(sisl.io.siesta.fdfSileSiesta method)
get_distribution() (in module sisl.physics)
(in module sisl.physics.distribution)
get_sile() (in module sisl.io)
get_sile_class() (in module sisl.io)
get_siles() (in module sisl.io)
gotSileGULP (class in sisl.io.gulp)
Grid (class in sisl)
grid() (sisl.physics.brillouinzone.MonkhorstPack class method)
(sisl.physics.MonkhorstPack class method)
gridncSileSiesta (class in sisl.io.siesta)
grids() (sisl.io.siesta.ncSileSiesta method)
gridSileSiesta (class in sisl.io.siesta)
H
h (in module sisl.constant)
H (sisl.physics.Hamiltonian attribute)
Hamiltonian (class in sisl.physics)
hassame() (sisl.Atoms method)
hbar (in module sisl.constant)
hcp() (in module sisl.geom)
hex() (sisl.constant.PhysicalConstant method)
Hk() (sisl.physics.Hamiltonian method)
honeycomb() (in module sisl.geom)
hsxSileSiesta (class in sisl.io.siesta)
hw (sisl.physics.EigenmodePhonon attribute)
(sisl.physics.EigenvaluePhonon attribute)
(sisl.physics.phonon.EigenmodePhonon attribute)
(sisl.physics.phonon.EigenvaluePhonon attribute)
I
icell (sisl.Geometry attribute)
(sisl.Grid attribute)
(sisl.SuperCell attribute)
imag (sisl.constant.PhysicalConstant attribute)
in_primitive() (sisl.physics.BandStructure static method)
(sisl.physics.BrillouinZone static method)
(sisl.physics.MonkhorstPack static method)
(sisl.physics.brillouinzone.BandStructure static method)
(sisl.physics.brillouinzone.BrillouinZone static method)
(sisl.physics.brillouinzone.MonkhorstPack static method)
includes() (sisl.io.siesta.fdfSileSiesta method)
index() (sisl.Atoms method)
(sisl.Grid method)
index2xyz() (sisl.Grid method)
info (sisl.physics.Coefficient attribute)
(sisl.physics.EigenmodePhonon attribute)
(sisl.physics.EigenstateElectron attribute)
(sisl.physics.EigenvalueElectron attribute)
(sisl.physics.EigenvaluePhonon attribute)
(sisl.physics.EigenvectorElectron attribute)
(sisl.physics.EigenvectorPhonon attribute)
(sisl.physics.State attribute)
(sisl.physics.StateC attribute)
(sisl.physics.electron.CoefficientElectron attribute)
(sisl.physics.electron.EigenstateElectron attribute)
(sisl.physics.electron.EigenvalueElectron attribute)
(sisl.physics.electron.EigenvectorElectron attribute)
(sisl.physics.electron.StateCElectron attribute)
(sisl.physics.electron.StateElectron attribute)
(sisl.physics.phonon.CoefficientPhonon attribute)
(sisl.physics.phonon.EigenmodePhonon attribute)
(sisl.physics.phonon.EigenvaluePhonon attribute)
(sisl.physics.phonon.EigenvectorPhonon attribute)
(sisl.physics.phonon.ModeCPhonon attribute)
(sisl.physics.phonon.ModePhonon attribute)
info() (sisl.io.tbtrans.phtavncSileTBtrans method)
(sisl.io.tbtrans.phtncSileTBtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
insert() (sisl.Atoms method)
(sisl.Geometry method)
interp() (sisl.Grid method)
inv_eff_mass_tensor() (sisl.physics.EigenstateElectron method)
(sisl.physics.electron.EigenstateElectron method)
(sisl.physics.electron.StateCElectron method)
ionncSileSiesta (class in sisl.io.siesta)
ionxmlSileSiesta (class in sisl.io.siesta)
iR() (sisl.Geometry method)
is_colinear (sisl.physics.Spin attribute)
is_integer() (sisl.constant.PhysicalConstant method)
is_noncolinear (sisl.physics.Spin attribute)
is_orthogonal() (sisl.Geometry method)
(sisl.Grid method)
(sisl.SuperCell method)
is_polarized (sisl.physics.Spin attribute)
is_spinorbit (sisl.physics.Spin attribute)
is_unpolarized (sisl.physics.Spin attribute)
isc_off (sisl.Geometry attribute)
(sisl.Grid attribute)
(sisl.SuperCell attribute)
iter() (sisl.Atom method)
(sisl.Atoms method)
(sisl.Geometry method)
(sisl.io.SileCDF method)
(sisl.io.siesta.gridncSileSiesta method)
(sisl.io.siesta.ionncSileSiesta method)
(sisl.io.siesta.ncSileSiesta method)
(sisl.io.siesta.tsvncSileSiesta method)
(sisl.io.tbtrans.deltancSileTBtrans method)
(sisl.io.tbtrans.dhncSileTBtrans method)
(sisl.io.tbtrans.phtavncSileTBtrans method)
(sisl.io.tbtrans.phtncSileTBtrans method)
(sisl.io.tbtrans.phtsencSileTBtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
(sisl.io.tbtrans.tbtsencSileTBtrans method)
(sisl.physics.BandStructure method)
(sisl.physics.BrillouinZone method)
(sisl.physics.Coefficient method)
(sisl.physics.DensityMatrix method)
(sisl.physics.DynamicalMatrix method)
(sisl.physics.EigenmodePhonon method)
(sisl.physics.EigenstateElectron method)
(sisl.physics.EigenvalueElectron method)
(sisl.physics.EigenvaluePhonon method)
(sisl.physics.EigenvectorElectron method)
(sisl.physics.EigenvectorPhonon method)
(sisl.physics.EnergyDensityMatrix method)
(sisl.physics.Hamiltonian method)
(sisl.physics.MonkhorstPack method)
(sisl.physics.SparseOrbitalBZ method)
(sisl.physics.SparseOrbitalBZSpin method)
(sisl.physics.State method)
(sisl.physics.StateC method)
(sisl.physics.brillouinzone.BandStructure method)
(sisl.physics.brillouinzone.BrillouinZone method)
(sisl.physics.brillouinzone.MonkhorstPack method)
(sisl.physics.electron.CoefficientElectron method)
(sisl.physics.electron.EigenstateElectron method)
(sisl.physics.electron.EigenvalueElectron method)
(sisl.physics.electron.EigenvectorElectron method)
(sisl.physics.electron.StateCElectron method)
(sisl.physics.electron.StateElectron method)
(sisl.physics.phonon.CoefficientPhonon method)
(sisl.physics.phonon.EigenmodePhonon method)
(sisl.physics.phonon.EigenvaluePhonon method)
(sisl.physics.phonon.EigenvectorPhonon method)
(sisl.physics.phonon.ModeCPhonon method)
(sisl.physics.phonon.ModePhonon method)
iter_block() (sisl.Geometry method)
iter_block_rand() (sisl.Geometry method)
iter_block_shape() (sisl.Geometry method)
iter_nnz() (sisl.physics.DensityMatrix method)
(sisl.SparseAtom method)
(sisl.SparseCSR method)
(sisl.SparseOrbital method)
(sisl.physics.DynamicalMatrix method)
(sisl.physics.EnergyDensityMatrix method)
(sisl.physics.Hamiltonian method)
(sisl.physics.SparseOrbitalBZ method)
(sisl.physics.SparseOrbitalBZSpin method)
iter_orbitals() (sisl.Geometry method)
iter_shape() (in module sisl.utils)
iter_species() (sisl.Geometry method)
K
k (sisl.io.tbtrans.phtavncSileTBtrans attribute)
(sisl.io.tbtrans.phtncSileTBtrans attribute)
(sisl.io.tbtrans.phtsencSileTBtrans attribute)
(sisl.io.tbtrans.tbtavncSileTBtrans attribute)
(sisl.io.tbtrans.tbtncSileTBtrans attribute)
(sisl.io.tbtrans.tbtsencSileTBtrans attribute)
(sisl.physics.BandStructure attribute)
(sisl.physics.BrillouinZone attribute)
(sisl.physics.MonkhorstPack attribute)
(sisl.physics.brillouinzone.BandStructure attribute)
(sisl.physics.brillouinzone.BrillouinZone attribute)
(sisl.physics.brillouinzone.MonkhorstPack attribute)
kind (sisl.physics.Spin attribute)
kindex() (sisl.io.tbtrans.phtavncSileTBtrans method)
(sisl.io.tbtrans.phtncSileTBtrans method)
(sisl.io.tbtrans.phtsencSileTBtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
(sisl.io.tbtrans.tbtsencSileTBtrans method)
kpSileSiesta (class in sisl.io.siesta)
kpt (sisl.io.tbtrans.phtavncSileTBtrans attribute)
(sisl.io.tbtrans.phtncSileTBtrans attribute)
(sisl.io.tbtrans.phtsencSileTBtrans attribute)
(sisl.io.tbtrans.tbtavncSileTBtrans attribute)
(sisl.io.tbtrans.tbtncSileTBtrans attribute)
(sisl.io.tbtrans.tbtsencSileTBtrans attribute)
kT() (sisl.io.tbtrans.phtavncSileTBtrans method)
(sisl.io.tbtrans.phtncSileTBtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
L
l (sisl.AtomicOrbital attribute)
(sisl.SphericalOrbital attribute)
lasto (sisl.Atoms attribute)
(sisl.Geometry attribute)
(sisl.io.tbtrans.phtavncSileTBtrans attribute)
(sisl.io.tbtrans.phtncSileTBtrans attribute)
(sisl.io.tbtrans.phtsencSileTBtrans attribute)
(sisl.io.tbtrans.tbtavncSileTBtrans attribute)
(sisl.io.tbtrans.tbtncSileTBtrans attribute)
(sisl.io.tbtrans.tbtsencSileTBtrans attribute)
lineark() (sisl.physics.BandStructure method)
(sisl.physics.brillouinzone.BandStructure method)
lineartick() (sisl.physics.BandStructure method)
(sisl.physics.brillouinzone.BandStructure method)
list2str() (in module sisl.utils)
lorentzian() (in module sisl.physics)
(in module sisl.physics.distribution)
lstranges() (in module sisl.utils)
M
m (sisl.AtomicOrbital attribute)
m_e (in module sisl.constant)
m_p (in module sisl.constant)
make_hermitian() (sisl.physics.DensityMatrix method)
(sisl.SparseAtom method)
(sisl.SparseOrbital method)
(sisl.physics.DynamicalMatrix method)
(sisl.physics.EnergyDensityMatrix method)
(sisl.physics.Hamiltonian method)
(sisl.physics.SparseOrbitalBZ method)
(sisl.physics.SparseOrbitalBZSpin method)
mass (sisl.Atoms attribute)
(sisl.Geometry attribute)
math_eval() (in module sisl.utils)
maxR() (sisl.Atom method)
(sisl.Atoms method)
(sisl.Geometry method)
mean() (sisl.Grid method)
mgrid() (sisl.Grid class method)
mirror() (sisl.Geometry method)
mode (sisl.physics.EigenmodePhonon attribute)
(sisl.physics.EigenvectorPhonon attribute)
(sisl.physics.phonon.EigenmodePhonon attribute)
(sisl.physics.phonon.EigenvectorPhonon attribute)
(sisl.physics.phonon.ModeCPhonon attribute)
(sisl.physics.phonon.ModePhonon attribute)
ModeCPhonon (class in sisl.physics.phonon)
ModePhonon (class in sisl.physics.phonon)
moldenSile (class in sisl.io.molden)
MonkhorstPack (class in sisl.physics)
(class in sisl.physics.brillouinzone)
move() (sisl.Geometry method)
(sisl.SuperCell method)
mu() (sisl.io.tbtrans.phtavncSileTBtrans method)
(sisl.io.tbtrans.phtncSileTBtrans method)
(sisl.io.tbtrans.phtsencSileTBtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
(sisl.io.tbtrans.tbtsencSileTBtrans method)
N
n (sisl.AtomicOrbital attribute)
n_btd() (sisl.io.tbtrans.phtavncSileTBtrans method)
(sisl.io.tbtrans.phtncSileTBtrans method)
(sisl.io.tbtrans.phtsencSileTBtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
(sisl.io.tbtrans.tbtsencSileTBtrans method)
n_s (sisl.Geometry attribute)
(sisl.Grid attribute)
(sisl.SuperCell attribute)
na (sisl.Geometry attribute)
(sisl.io.tbtrans.phtavncSileTBtrans attribute)
(sisl.io.tbtrans.phtncSileTBtrans attribute)
(sisl.io.tbtrans.phtsencSileTBtrans attribute)
(sisl.io.tbtrans.tbtavncSileTBtrans attribute)
(sisl.io.tbtrans.tbtncSileTBtrans attribute)
(sisl.io.tbtrans.tbtsencSileTBtrans attribute)
na_b (sisl.io.tbtrans.phtavncSileTBtrans attribute)
(sisl.io.tbtrans.phtncSileTBtrans attribute)
(sisl.io.tbtrans.phtsencSileTBtrans attribute)
(sisl.io.tbtrans.tbtavncSileTBtrans attribute)
(sisl.io.tbtrans.tbtncSileTBtrans attribute)
(sisl.io.tbtrans.tbtsencSileTBtrans attribute)
na_buffer (sisl.io.tbtrans.phtavncSileTBtrans attribute)
(sisl.io.tbtrans.phtncSileTBtrans attribute)
(sisl.io.tbtrans.phtsencSileTBtrans attribute)
(sisl.io.tbtrans.tbtavncSileTBtrans attribute)
(sisl.io.tbtrans.tbtncSileTBtrans attribute)
(sisl.io.tbtrans.tbtsencSileTBtrans attribute)
na_d (sisl.io.tbtrans.phtavncSileTBtrans attribute)
(sisl.io.tbtrans.phtncSileTBtrans attribute)
(sisl.io.tbtrans.phtsencSileTBtrans attribute)
(sisl.io.tbtrans.tbtavncSileTBtrans attribute)
(sisl.io.tbtrans.tbtncSileTBtrans attribute)
(sisl.io.tbtrans.tbtsencSileTBtrans attribute)
na_dev (sisl.io.tbtrans.phtavncSileTBtrans attribute)
(sisl.io.tbtrans.phtncSileTBtrans attribute)
(sisl.io.tbtrans.phtsencSileTBtrans attribute)
(sisl.io.tbtrans.tbtavncSileTBtrans attribute)
(sisl.io.tbtrans.tbtncSileTBtrans attribute)
(sisl.io.tbtrans.tbtsencSileTBtrans attribute)
na_s (sisl.Geometry attribute)
na_u (sisl.io.tbtrans.phtavncSileTBtrans attribute)
(sisl.io.tbtrans.phtncSileTBtrans attribute)
(sisl.io.tbtrans.phtsencSileTBtrans attribute)
(sisl.io.tbtrans.tbtavncSileTBtrans attribute)
(sisl.io.tbtrans.tbtncSileTBtrans attribute)
(sisl.io.tbtrans.tbtsencSileTBtrans attribute)
name() (sisl.AtomicOrbital method)
(sisl.Orbital method)
(sisl.SphericalOrbital method)
names (sisl.Geometry attribute)
nanotube() (in module sisl.geom)
ncSileSiesta (class in sisl.io.siesta)
nE (sisl.io.tbtrans.phtavncSileTBtrans attribute)
ne (sisl.io.tbtrans.phtavncSileTBtrans attribute)
nE (sisl.io.tbtrans.phtncSileTBtrans attribute)
ne (sisl.io.tbtrans.phtncSileTBtrans attribute)
nE (sisl.io.tbtrans.phtsencSileTBtrans attribute)
ne (sisl.io.tbtrans.phtsencSileTBtrans attribute)
nE (sisl.io.tbtrans.tbtavncSileTBtrans attribute)
ne (sisl.io.tbtrans.tbtavncSileTBtrans attribute)
nE (sisl.io.tbtrans.tbtncSileTBtrans attribute)
ne (sisl.io.tbtrans.tbtncSileTBtrans attribute)
nE (sisl.io.tbtrans.tbtsencSileTBtrans attribute)
ne (sisl.io.tbtrans.tbtsencSileTBtrans attribute)
NEUMANN (sisl.Grid attribute)
next() (sisl.Selector method)
nk (sisl.io.tbtrans.phtavncSileTBtrans attribute)
(sisl.io.tbtrans.phtncSileTBtrans attribute)
(sisl.io.tbtrans.phtsencSileTBtrans attribute)
(sisl.io.tbtrans.tbtavncSileTBtrans attribute)
(sisl.io.tbtrans.tbtncSileTBtrans attribute)
(sisl.io.tbtrans.tbtsencSileTBtrans attribute)
nkpt (sisl.io.tbtrans.phtavncSileTBtrans attribute)
(sisl.io.tbtrans.phtncSileTBtrans attribute)
(sisl.io.tbtrans.phtsencSileTBtrans attribute)
(sisl.io.tbtrans.tbtavncSileTBtrans attribute)
(sisl.io.tbtrans.tbtncSileTBtrans attribute)
(sisl.io.tbtrans.tbtsencSileTBtrans attribute)
nnz (sisl.physics.DensityMatrix attribute)
(sisl.SparseAtom attribute)
(sisl.SparseCSR attribute)
(sisl.SparseOrbital attribute)
(sisl.physics.DynamicalMatrix attribute)
(sisl.physics.EnergyDensityMatrix attribute)
(sisl.physics.Hamiltonian attribute)
(sisl.physics.SparseOrbitalBZ attribute)
(sisl.physics.SparseOrbitalBZSpin attribute)
no (sisl.Atom attribute)
(sisl.Atoms attribute)
(sisl.Geometry attribute)
(sisl.io.tbtrans.phtavncSileTBtrans attribute)
(sisl.io.tbtrans.phtncSileTBtrans attribute)
(sisl.io.tbtrans.phtsencSileTBtrans attribute)
(sisl.io.tbtrans.tbtavncSileTBtrans attribute)
(sisl.io.tbtrans.tbtncSileTBtrans attribute)
(sisl.io.tbtrans.tbtsencSileTBtrans attribute)
no_d (sisl.io.tbtrans.phtavncSileTBtrans attribute)
(sisl.io.tbtrans.phtncSileTBtrans attribute)
(sisl.io.tbtrans.phtsencSileTBtrans attribute)
(sisl.io.tbtrans.tbtavncSileTBtrans attribute)
(sisl.io.tbtrans.tbtncSileTBtrans attribute)
(sisl.io.tbtrans.tbtsencSileTBtrans attribute)
no_s (sisl.Geometry attribute)
no_u (sisl.io.tbtrans.phtavncSileTBtrans attribute)
(sisl.io.tbtrans.phtncSileTBtrans attribute)
(sisl.io.tbtrans.phtsencSileTBtrans attribute)
(sisl.io.tbtrans.tbtavncSileTBtrans attribute)
(sisl.io.tbtrans.tbtncSileTBtrans attribute)
(sisl.io.tbtrans.tbtsencSileTBtrans attribute)
non_orthogonal (sisl.physics.DensityMatrix attribute)
(sisl.physics.DynamicalMatrix attribute)
(sisl.physics.EnergyDensityMatrix attribute)
(sisl.physics.Hamiltonian attribute)
(sisl.physics.SparseOrbitalBZ attribute)
(sisl.physics.SparseOrbitalBZSpin attribute)
NONCOLINEAR (sisl.physics.Spin attribute)
nonzero() (sisl.physics.DensityMatrix method)
(sisl.SparseAtom method)
(sisl.SparseCSR method)
(sisl.SparseOrbital method)
(sisl.physics.DynamicalMatrix method)
(sisl.physics.EnergyDensityMatrix method)
(sisl.physics.Hamiltonian method)
(sisl.physics.SparseOrbitalBZ method)
(sisl.physics.SparseOrbitalBZSpin method)
norm() (sisl.io.tbtrans.phtavncSileTBtrans method)
(sisl.Quaternion method)
(sisl.io.tbtrans.phtncSileTBtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
(sisl.physics.EigenmodePhonon method)
(sisl.physics.EigenstateElectron method)
(sisl.physics.EigenvectorElectron method)
(sisl.physics.EigenvectorPhonon method)
(sisl.physics.State method)
(sisl.physics.StateC method)
(sisl.physics.electron.EigenstateElectron method)
(sisl.physics.electron.EigenvectorElectron method)
(sisl.physics.electron.StateCElectron method)
(sisl.physics.electron.StateElectron method)
(sisl.physics.phonon.EigenmodePhonon method)
(sisl.physics.phonon.EigenvectorPhonon method)
(sisl.physics.phonon.ModeCPhonon method)
(sisl.physics.phonon.ModePhonon method)
norm2() (sisl.physics.EigenmodePhonon method)
(sisl.physics.EigenstateElectron method)
(sisl.physics.EigenvectorElectron method)
(sisl.physics.EigenvectorPhonon method)
(sisl.physics.State method)
(sisl.physics.StateC method)
(sisl.physics.electron.EigenstateElectron method)
(sisl.physics.electron.EigenvectorElectron method)
(sisl.physics.electron.StateCElectron method)
(sisl.physics.electron.StateElectron method)
(sisl.physics.phonon.EigenmodePhonon method)
(sisl.physics.phonon.EigenvectorPhonon method)
(sisl.physics.phonon.ModeCPhonon method)
(sisl.physics.phonon.ModePhonon method)
normalize() (sisl.physics.EigenmodePhonon method)
(sisl.physics.EigenstateElectron method)
(sisl.physics.EigenvectorElectron method)
(sisl.physics.EigenvectorPhonon method)
(sisl.physics.State method)
(sisl.physics.StateC method)
(sisl.physics.electron.EigenstateElectron method)
(sisl.physics.electron.EigenvectorElectron method)
(sisl.physics.electron.StateCElectron method)
(sisl.physics.electron.StateElectron method)
(sisl.physics.phonon.EigenmodePhonon method)
(sisl.physics.phonon.EigenvectorPhonon method)
(sisl.physics.phonon.ModeCPhonon method)
(sisl.physics.phonon.ModePhonon method)
nsc (sisl.Geometry attribute)
(sisl.Grid attribute)
(sisl.SuperCell attribute)
NullShape (class in sisl.shape)
O
o2a() (sisl.Geometry method)
o2isc() (sisl.Geometry method)
o2p() (sisl.io.tbtrans.phtavncSileTBtrans method)
(sisl.io.tbtrans.phtncSileTBtrans method)
(sisl.io.tbtrans.phtsencSileTBtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
(sisl.io.tbtrans.tbtsencSileTBtrans method)
o2sc() (sisl.Geometry method)
o_dev (sisl.io.tbtrans.phtavncSileTBtrans attribute)
(sisl.io.tbtrans.phtncSileTBtrans attribute)
(sisl.io.tbtrans.phtsencSileTBtrans attribute)
(sisl.io.tbtrans.tbtavncSileTBtrans attribute)
(sisl.io.tbtrans.tbtncSileTBtrans attribute)
(sisl.io.tbtrans.tbtsencSileTBtrans attribute)
occupation() (sisl.physics.EigenstateElectron method)
(sisl.physics.EigenvalueElectron method)
(sisl.physics.electron.EigenstateElectron method)
(sisl.physics.electron.EigenvalueElectron method)
offset() (sisl.SuperCell method)
omxSileOpenMX (class in sisl.io.openmx)
OPEN (sisl.Grid attribute)
optimize_nsc() (sisl.Geometry method)
orb (sisl.AtomicOrbital attribute)
orbindxSileSiesta (class in sisl.io.siesta)
Orbital (class in sisl)
orbital() (sisl.Atoms method)
orbital_ACOHP() (sisl.io.tbtrans.phtavncSileTBtrans method)
(sisl.io.tbtrans.phtncSileTBtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
orbital_ACOOP() (sisl.io.tbtrans.phtavncSileTBtrans method)
(sisl.io.tbtrans.phtncSileTBtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
orbital_COHP() (sisl.io.tbtrans.phtavncSileTBtrans method)
(sisl.io.tbtrans.phtncSileTBtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
orbital_COOP() (sisl.io.tbtrans.phtavncSileTBtrans method)
(sisl.io.tbtrans.phtncSileTBtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
orbital_current() (sisl.io.tbtrans.phtavncSileTBtrans method)
(sisl.io.tbtrans.phtncSileTBtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
orbitals (sisl.Atoms attribute)
(sisl.Geometry attribute)
orboccSileScaleUp (class in sisl.io.scaleup)
ordered (sisl.Selector attribute)
origo (sisl.Geometry attribute)
(sisl.Grid attribute)
(sisl.SuperCell attribute)
(sisl.shape.Cube attribute)
(sisl.shape.Cuboid attribute)
oRij() (sisl.Geometry method)
orij() (sisl.Geometry method)
orthogonal (sisl.physics.DensityMatrix attribute)
(sisl.physics.DynamicalMatrix attribute)
(sisl.physics.EnergyDensityMatrix attribute)
(sisl.physics.Hamiltonian attribute)
(sisl.physics.SparseOrbitalBZ attribute)
(sisl.physics.SparseOrbitalBZSpin attribute)
osc2uc() (sisl.Geometry method)
outer() (sisl.physics.EigenmodePhonon method)
(sisl.physics.EigenstateElectron method)
(sisl.physics.EigenvectorElectron method)
(sisl.physics.EigenvectorPhonon method)
(sisl.physics.State method)
(sisl.physics.StateC method)
(sisl.physics.electron.EigenstateElectron method)
(sisl.physics.electron.EigenvectorElectron method)
(sisl.physics.electron.StateCElectron method)
(sisl.physics.electron.StateElectron method)
(sisl.physics.phonon.EigenmodePhonon method)
(sisl.physics.phonon.EigenvectorPhonon method)
(sisl.physics.phonon.ModeCPhonon method)
(sisl.physics.phonon.ModePhonon method)
outSileSiesta (class in sisl.io.siesta)
P
P (sisl.AtomicOrbital attribute)
parallel() (sisl.SuperCell method)
param_circle() (sisl.physics.BandStructure class method)
(sisl.physics.BrillouinZone class method)
(sisl.physics.MonkhorstPack class method)
(sisl.physics.brillouinzone.BandStructure class method)
(sisl.physics.brillouinzone.BrillouinZone class method)
(sisl.physics.brillouinzone.MonkhorstPack class method)
parameters() (sisl.SuperCell method)
parametrize() (sisl.physics.BandStructure class method)
(sisl.physics.BrillouinZone class method)
(sisl.physics.MonkhorstPack class method)
(sisl.physics.brillouinzone.BandStructure class method)
(sisl.physics.brillouinzone.BrillouinZone class method)
(sisl.physics.brillouinzone.MonkhorstPack class method)
parent (sisl.physics.Coefficient attribute)
(sisl.physics.EigenmodePhonon attribute)
(sisl.physics.EigenstateElectron attribute)
(sisl.physics.EigenvalueElectron attribute)
(sisl.physics.EigenvaluePhonon attribute)
(sisl.physics.EigenvectorElectron attribute)
(sisl.physics.EigenvectorPhonon attribute)
(sisl.physics.State attribute)
(sisl.physics.StateC attribute)
(sisl.physics.electron.CoefficientElectron attribute)
(sisl.physics.electron.EigenstateElectron attribute)
(sisl.physics.electron.EigenvalueElectron attribute)
(sisl.physics.electron.EigenvectorElectron attribute)
(sisl.physics.electron.StateCElectron attribute)
(sisl.physics.electron.StateElectron attribute)
(sisl.physics.phonon.CoefficientPhonon attribute)
(sisl.physics.phonon.EigenmodePhonon attribute)
(sisl.physics.phonon.EigenvaluePhonon attribute)
(sisl.physics.phonon.EigenvectorPhonon attribute)
(sisl.physics.phonon.ModeCPhonon attribute)
(sisl.physics.phonon.ModePhonon attribute)
pdbSile (class in sisl.io.pdb)
PDOS() (in module sisl.physics.electron)
(in module sisl.physics.phonon)
(sisl.physics.DynamicalMatrix method)
(sisl.physics.EigenmodePhonon method)
(sisl.physics.EigenstateElectron method)
(sisl.physics.Hamiltonian method)
(sisl.physics.electron.EigenstateElectron method)
(sisl.physics.phonon.EigenmodePhonon method)
pdosSileSiesta (class in sisl.io.siesta)
performances (sisl.Selector attribute)
PERIODIC (sisl.Grid attribute)
PeriodicTable (class in sisl)
phtavncSileTBtrans (class in sisl.io.tbtrans)
phtncSileTBtrans (class in sisl.io.tbtrans)
phtsencSileTBtrans (class in sisl.io.tbtrans)
PhysicalConstant (class in sisl.constant)
pivot() (sisl.io.tbtrans.phtavncSileTBtrans method)
(sisl.io.tbtrans.phtncSileTBtrans method)
(sisl.io.tbtrans.phtsencSileTBtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
(sisl.io.tbtrans.tbtsencSileTBtrans method)
plane() (sisl.SuperCell method)
POLARIZED (sisl.physics.Spin attribute)
poscarSileVASP (class in sisl.io.vasp)
prepend() (sisl.Atoms method)
(sisl.Geometry method)
(sisl.Selector method)
(sisl.SuperCell method)
print() (sisl.io.siesta.fdfSileSiesta static method)
psi() (sisl.AtomicOrbital method)
(sisl.Orbital method)
(sisl.SphericalOrbital method)
(sisl.physics.EigenstateElectron method)
(sisl.physics.EigenvectorElectron method)
(sisl.physics.electron.EigenstateElectron method)
(sisl.physics.electron.EigenvectorElectron method)
(sisl.physics.electron.StateCElectron method)
(sisl.physics.electron.StateElectron method)
psi_spher() (sisl.AtomicOrbital method)
(sisl.Orbital method)
(sisl.SphericalOrbital method)
pyamg_boundary_condition() (sisl.Grid method)
pyamg_fix() (sisl.Grid method)
pyamg_index() (sisl.Grid method)
pyamg_source() (sisl.Grid class method)
Q
q0 (sisl.Atom attribute)
(sisl.AtomicOrbital attribute)
(sisl.Atoms attribute)
(sisl.Geometry attribute)
(sisl.Orbital attribute)
(sisl.SphericalOrbital attribute)
Quaternion (class in sisl)
R
R (sisl.Atom attribute)
(sisl.AtomicOrbital attribute)
(sisl.Orbital attribute)
(sisl.SphericalOrbital attribute)
radial() (sisl.AtomicOrbital method)
(sisl.Orbital method)
(sisl.SphericalOrbital method)
radian (sisl.Quaternion attribute)
radii() (sisl.PeriodicTable method)
radius (sisl.shape.Ellipsoid attribute)
(sisl.shape.Sphere attribute)
radius() (sisl.Atom method)
(sisl.PeriodicTable method)
rcell (sisl.Geometry attribute)
(sisl.Grid attribute)
(sisl.SuperCell attribute)
(sisl.physics.BandStructure attribute)
(sisl.physics.BrillouinZone attribute)
(sisl.physics.MonkhorstPack attribute)
(sisl.physics.brillouinzone.BandStructure attribute)
(sisl.physics.brillouinzone.BrillouinZone attribute)
(sisl.physics.brillouinzone.MonkhorstPack attribute)
read() (sisl.Geometry static method)
(sisl.Grid static method)
(sisl.SuperCell static method)
(sisl.io.BaseSile method)
(sisl.io.Sile method)
(sisl.io.SileBin method)
(sisl.io.SileCDF method)
(sisl.io.bigdft.asciiSileBigDFT method)
(sisl.io.cube.cubeSile method)
(sisl.io.gulp.fcSileGULP method)
(sisl.io.gulp.gotSileGULP method)
(sisl.io.molden.moldenSile method)
(sisl.io.openmx.omxSileOpenMX method)
(sisl.io.pdb.pdbSile method)
(sisl.io.scaleup.orboccSileScaleUp method)
(sisl.io.scaleup.refSileScaleUp method)
(sisl.io.scaleup.rhamSileScaleUp method)
(sisl.io.siesta.bandsSileSiesta method)
(sisl.io.siesta.dmSileSiesta method)
(sisl.io.siesta.eigSileSiesta method)
(sisl.io.siesta.faSileSiesta method)
(sisl.io.siesta.fcSileSiesta method)
(sisl.io.siesta.fdfSileSiesta method)
(sisl.io.siesta.gridSileSiesta method)
(sisl.io.siesta.gridncSileSiesta method)
(sisl.io.siesta.hsxSileSiesta method)
(sisl.io.siesta.ionncSileSiesta method)
(sisl.io.siesta.ionxmlSileSiesta method)
(sisl.io.siesta.kpSileSiesta method)
(sisl.io.siesta.ncSileSiesta method)
(sisl.io.siesta.orbindxSileSiesta method)
(sisl.io.siesta.outSileSiesta method)
(sisl.io.siesta.pdosSileSiesta method)
(sisl.io.siesta.rkpSileSiesta method)
(sisl.io.siesta.tsdeSileSiesta method)
(sisl.io.siesta.tsgfSileSiesta method)
(sisl.io.siesta.tshsSileSiesta method)
(sisl.io.siesta.tsvncSileSiesta method)
(sisl.io.siesta.xvSileSiesta method)
(sisl.io.table.tableSile method)
(sisl.io.tbtrans.deltancSileTBtrans method)
(sisl.io.tbtrans.dhncSileTBtrans method)
(sisl.io.tbtrans.phtavncSileTBtrans method)
(sisl.io.tbtrans.phtncSileTBtrans method)
(sisl.io.tbtrans.phtsencSileTBtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtgfSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
(sisl.io.tbtrans.tbtsencSileTBtrans method)
(sisl.io.vasp.carSileVASP method)
(sisl.io.vasp.contcarSileVASP method)
(sisl.io.vasp.doscarSileVASP method)
(sisl.io.vasp.eigenvalSileVASP method)
(sisl.io.vasp.poscarSileVASP method)
(sisl.io.wannier90.winSileWannier90 method)
(sisl.io.xsf.xsfSile method)
(sisl.io.xyz.xyzSile method)
(sisl.physics.DensityMatrix static method)
(sisl.physics.DynamicalMatrix static method)
(sisl.physics.EnergyDensityMatrix static method)
(sisl.physics.Hamiltonian static method)
read_atom() (sisl.io.scaleup.orboccSileScaleUp method)
read_basis() (sisl.io.openmx.omxSileOpenMX method)
(sisl.io.siesta.fdfSileSiesta method)
(sisl.io.siesta.ionncSileSiesta method)
(sisl.io.siesta.ionxmlSileSiesta method)
(sisl.io.siesta.ncSileSiesta method)
(sisl.io.siesta.orbindxSileSiesta method)
read_brillouinzone() (sisl.io.siesta.kpSileSiesta method)
(sisl.io.siesta.rkpSileSiesta method)
read_data() (sisl.io.siesta.bandsSileSiesta method)
(sisl.io.siesta.eigSileSiesta method)
(sisl.io.siesta.faSileSiesta method)
(sisl.io.siesta.kpSileSiesta method)
(sisl.io.siesta.outSileSiesta method)
(sisl.io.siesta.pdosSileSiesta method)
(sisl.io.siesta.rkpSileSiesta method)
(sisl.io.siesta.xvSileSiesta method)
(sisl.io.table.tableSile method)
(sisl.io.tbtrans.phtavncSileTBtrans method)
(sisl.io.tbtrans.phtncSileTBtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
(sisl.io.vasp.doscarSileVASP method)
(sisl.io.vasp.eigenvalSileVASP method)
read_delta() (sisl.io.tbtrans.deltancSileTBtrans method)
(sisl.io.tbtrans.dhncSileTBtrans method)
read_density_matrix() (sisl.io.siesta.dmSileSiesta method)
(sisl.io.siesta.fdfSileSiesta method)
(sisl.io.siesta.ncSileSiesta method)
(sisl.io.siesta.tsdeSileSiesta method)
read_dynamical_matrix() (sisl.io.gulp.gotSileGULP method)
(sisl.io.siesta.fdfSileSiesta method)
(sisl.io.siesta.ncSileSiesta method)
read_energy_density_matrix() (sisl.io.siesta.fdfSileSiesta method)
(sisl.io.siesta.ncSileSiesta method)
(sisl.io.siesta.tsdeSileSiesta method)
read_force() (sisl.io.siesta.faSileSiesta method)
(sisl.io.siesta.fcSileSiesta method)
(sisl.io.siesta.fdfSileSiesta method)
(sisl.io.siesta.ncSileSiesta method)
(sisl.io.siesta.outSileSiesta method)
read_force_constant() (sisl.io.gulp.fcSileGULP method)
(sisl.io.siesta.fcSileSiesta method)
(sisl.io.siesta.fdfSileSiesta method)
(sisl.io.siesta.ncSileSiesta method)
read_geometry() (sisl.io.bigdft.asciiSileBigDFT method)
(sisl.io.cube.cubeSile method)
(sisl.io.gulp.gotSileGULP method)
(sisl.io.openmx.omxSileOpenMX method)
(sisl.io.pdb.pdbSile method)
(sisl.io.scaleup.refSileScaleUp method)
(sisl.io.siesta.fdfSileSiesta method)
(sisl.io.siesta.ncSileSiesta method)
(sisl.io.siesta.outSileSiesta method)
(sisl.io.siesta.tshsSileSiesta method)
(sisl.io.siesta.xvSileSiesta method)
(sisl.io.tbtrans.deltancSileTBtrans method)
(sisl.io.tbtrans.dhncSileTBtrans method)
(sisl.io.tbtrans.phtavncSileTBtrans method)
(sisl.io.tbtrans.phtncSileTBtrans method)
(sisl.io.tbtrans.phtsencSileTBtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
(sisl.io.tbtrans.tbtsencSileTBtrans method)
(sisl.io.vasp.carSileVASP method)
(sisl.io.vasp.contcarSileVASP method)
(sisl.io.vasp.poscarSileVASP method)
(sisl.io.wannier90.winSileWannier90 method)
(sisl.io.xsf.xsfSile method)
(sisl.io.xyz.xyzSile method)
read_grid() (sisl.io.cube.cubeSile method)
(sisl.io.siesta.fdfSileSiesta method)
(sisl.io.siesta.gridSileSiesta method)
(sisl.io.siesta.gridncSileSiesta method)
(sisl.io.siesta.ncSileSiesta method)
(sisl.io.siesta.tsvncSileSiesta method)
read_hamiltonian() (sisl.io.scaleup.rhamSileScaleUp method)
(sisl.io.siesta.fdfSileSiesta method)
(sisl.io.siesta.hsxSileSiesta method)
(sisl.io.siesta.ncSileSiesta method)
(sisl.io.siesta.tshsSileSiesta method)
(sisl.io.wannier90.winSileWannier90 method)
read_moment() (sisl.io.siesta.outSileSiesta method)
read_overlap() (sisl.io.siesta.hsxSileSiesta method)
(sisl.io.siesta.ncSileSiesta method)
(sisl.io.siesta.tshsSileSiesta method)
read_species() (sisl.io.siesta.outSileSiesta method)
read_super() (sisl.io.gulp.gotSileGULP method)
read_supercell() (sisl.io.cube.cubeSile method)
(sisl.io.gulp.gotSileGULP method)
(sisl.io.openmx.omxSileOpenMX method)
(sisl.io.pdb.pdbSile method)
(sisl.io.scaleup.refSileScaleUp method)
(sisl.io.siesta.fdfSileSiesta method)
(sisl.io.siesta.gridSileSiesta method)
(sisl.io.siesta.gridncSileSiesta method)
(sisl.io.siesta.ncSileSiesta method)
(sisl.io.siesta.tshsSileSiesta method)
(sisl.io.siesta.xvSileSiesta method)
(sisl.io.tbtrans.deltancSileTBtrans method)
(sisl.io.tbtrans.dhncSileTBtrans method)
(sisl.io.tbtrans.phtavncSileTBtrans method)
(sisl.io.tbtrans.phtncSileTBtrans method)
(sisl.io.tbtrans.phtsencSileTBtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
(sisl.io.tbtrans.tbtsencSileTBtrans method)
(sisl.io.vasp.carSileVASP method)
(sisl.io.vasp.contcarSileVASP method)
(sisl.io.vasp.poscarSileVASP method)
(sisl.io.wannier90.winSileWannier90 method)
read_supercell_nsc() (sisl.io.siesta.fdfSileSiesta method)
(sisl.io.siesta.ncSileSiesta method)
(sisl.io.siesta.orbindxSileSiesta method)
read_velocity() (sisl.io.siesta.xvSileSiesta method)
real (sisl.constant.PhysicalConstant attribute)
RecursiveSI (class in sisl.physics)
reduce() (sisl.Atoms method)
(sisl.Geometry method)
refSileScaleUp (class in sisl.io.scaleup)
remove() (sisl.Atom method)
(sisl.Atoms method)
(sisl.Geometry method)
(sisl.Grid method)
(sisl.SparseAtom method)
(sisl.SparseCSR method)
(sisl.SparseOrbital method)
(sisl.physics.DensityMatrix method)
(sisl.physics.DynamicalMatrix method)
(sisl.physics.EnergyDensityMatrix method)
(sisl.physics.Hamiltonian method)
(sisl.physics.SparseOrbitalBZ method)
(sisl.physics.SparseOrbitalBZSpin method)
remove_part() (sisl.Grid method)
reorder() (sisl.Atoms method)
(sisl.Geometry method)
repeat() (sisl.Atoms method)
(sisl.Geometry method)
(sisl.SparseAtom method)
(sisl.SparseOrbital method)
(sisl.SuperCell method)
(sisl.physics.DensityMatrix method)
(sisl.physics.DynamicalMatrix method)
(sisl.physics.EnergyDensityMatrix method)
(sisl.physics.Hamiltonian method)
(sisl.physics.SparseOrbitalBZ method)
(sisl.physics.SparseOrbitalBZSpin method)
replace() (sisl.Atoms method)
(sisl.physics.MonkhorstPack method)
(sisl.physics.brillouinzone.MonkhorstPack method)
replace_atom() (sisl.Atoms method)
reset() (sisl.physics.DensityMatrix method)
(sisl.Selector method)
(sisl.SparseAtom method)
(sisl.SparseOrbital method)
(sisl.physics.DynamicalMatrix method)
(sisl.physics.EnergyDensityMatrix method)
(sisl.physics.Hamiltonian method)
(sisl.physics.SparseOrbitalBZ method)
(sisl.physics.SparseOrbitalBZSpin method)
reverse() (sisl.Atoms method)
(sisl.Geometry method)
rhamSileScaleUp (class in sisl.io.scaleup)
Rij() (sisl.Geometry method)
rij() (sisl.Geometry method)
Rij() (sisl.physics.DensityMatrix method)
rij() (sisl.physics.DensityMatrix method)
Rij() (sisl.physics.DynamicalMatrix method)
rij() (sisl.physics.DynamicalMatrix method)
Rij() (sisl.physics.EnergyDensityMatrix method)
rij() (sisl.physics.EnergyDensityMatrix method)
Rij() (sisl.physics.Hamiltonian method)
rij() (sisl.physics.Hamiltonian method)
Rij() (sisl.physics.SparseOrbitalBZ method)
rij() (sisl.physics.SparseOrbitalBZ method)
Rij() (sisl.physics.SparseOrbitalBZSpin method)
rij() (sisl.physics.SparseOrbitalBZSpin method)
Rij() (sisl.SparseAtom method)
rij() (sisl.SparseAtom method)
Rij() (sisl.SparseOrbital method)
rij() (sisl.SparseOrbital method)
rkpSileSiesta (class in sisl.io.siesta)
rotate() (sisl.Geometry method)
(sisl.Quaternion method)
(sisl.SuperCell method)
rotate_miller() (sisl.Geometry method)
rotatea() (sisl.Geometry method)
(sisl.SuperCell method)
rotateb() (sisl.Geometry method)
(sisl.SuperCell method)
rotatec() (sisl.Geometry method)
(sisl.SuperCell method)
routines (sisl.Selector attribute)
S
S (sisl.physics.DensityMatrix attribute)
(sisl.physics.DynamicalMatrix attribute)
(sisl.physics.EnergyDensityMatrix attribute)
(sisl.physics.Hamiltonian attribute)
(sisl.physics.SparseOrbitalBZ attribute)
(sisl.physics.SparseOrbitalBZSpin attribute)
sc() (in module sisl.geom)
sc2uc() (sisl.Geometry method)
sc_index() (sisl.Geometry method)
(sisl.Grid method)
(sisl.SuperCell method)
sc_off (sisl.Geometry attribute)
(sisl.Grid attribute)
(sisl.SuperCell attribute)
scale() (sisl.Atom method)
(sisl.AtomicOrbital method)
(sisl.Atoms method)
(sisl.Geometry method)
(sisl.Orbital method)
(sisl.SphericalOrbital method)
(sisl.SuperCell method)
(sisl.shape.Cube method)
(sisl.shape.Cuboid method)
(sisl.shape.Ellipsoid method)
(sisl.shape.NullShape method)
(sisl.shape.Shape method)
(sisl.shape.Sphere method)
select_best() (sisl.Selector method)
Selector (class in sisl)
self_energy() (sisl.io.tbtrans.phtsencSileTBtrans method)
(sisl.io.tbtrans.tbtsencSileTBtrans method)
(sisl.physics.RecursiveSI method)
(sisl.physics.SelfEnergy method)
(sisl.physics.SemiInfinite method)
self_energy_average() (sisl.io.tbtrans.phtsencSileTBtrans method)
(sisl.io.tbtrans.tbtsencSileTBtrans method)
SelfEnergy (class in sisl.physics)
SemiInfinite (class in sisl.physics)
set() (sisl.io.siesta.fdfSileSiesta method)
set_bc() (sisl.Grid method)
set_boundary() (sisl.Grid method)
set_boundary_condition() (sisl.Grid method)
set_center() (sisl.shape.Cube method)
(sisl.shape.Cuboid method)
(sisl.shape.Ellipsoid method)
(sisl.shape.Sphere method)
set_dyn_key() (sisl.io.gulp.gotSileGULP method)
set_dynamical_matrix_key() (sisl.io.gulp.gotSileGULP method)
set_geom() (sisl.Grid method)
set_geometry() (sisl.Grid method)
set_geometry_key() (sisl.io.gulp.gotSileGULP method)
set_grid() (sisl.Grid method)
set_key() (sisl.io.gulp.gotSileGULP method)
set_nsc() (sisl.Geometry method)
(sisl.Grid method)
(sisl.SparseAtom method)
(sisl.SparseOrbital method)
(sisl.SuperCell method)
(sisl.physics.DensityMatrix method)
(sisl.physics.DynamicalMatrix method)
(sisl.physics.EnergyDensityMatrix method)
(sisl.physics.Hamiltonian method)
(sisl.physics.SparseOrbitalBZ method)
(sisl.physics.SparseOrbitalBZSpin method)
set_origo() (sisl.shape.Cube method)
(sisl.shape.Cuboid method)
set_parent() (sisl.physics.BandStructure method)
(sisl.physics.BrillouinZone method)
(sisl.physics.MonkhorstPack method)
(sisl.physics.brillouinzone.BandStructure method)
(sisl.physics.brillouinzone.BrillouinZone method)
(sisl.physics.brillouinzone.MonkhorstPack method)
set_radial() (sisl.AtomicOrbital method)
(sisl.SphericalOrbital method)
set_sc() (sisl.Geometry method)
(sisl.Grid method)
set_supercell() (sisl.Geometry method)
(sisl.Grid method)
set_supercell_key() (sisl.io.gulp.gotSileGULP method)
Shape (class in sisl.shape)
shape (sisl.Grid attribute)
(sisl.SparseAtom attribute)
(sisl.SparseCSR attribute)
(sisl.SparseOrbital attribute)
(sisl.physics.Coefficient attribute)
(sisl.physics.DensityMatrix attribute)
(sisl.physics.DynamicalMatrix attribute)
(sisl.physics.EigenmodePhonon attribute)
(sisl.physics.EigenstateElectron attribute)
(sisl.physics.EigenvalueElectron attribute)
(sisl.physics.EigenvaluePhonon attribute)
(sisl.physics.EigenvectorElectron attribute)
(sisl.physics.EigenvectorPhonon attribute)
(sisl.physics.EnergyDensityMatrix attribute)
(sisl.physics.Hamiltonian attribute)
(sisl.physics.SparseOrbitalBZ attribute)
(sisl.physics.SparseOrbitalBZSpin attribute)
(sisl.physics.State attribute)
(sisl.physics.StateC attribute)
(sisl.physics.electron.CoefficientElectron attribute)
(sisl.physics.electron.EigenstateElectron attribute)
(sisl.physics.electron.EigenvalueElectron attribute)
(sisl.physics.electron.EigenvectorElectron attribute)
(sisl.physics.electron.StateCElectron attribute)
(sisl.physics.electron.StateElectron attribute)
(sisl.physics.phonon.CoefficientPhonon attribute)
(sisl.physics.phonon.EigenmodePhonon attribute)
(sisl.physics.phonon.EigenvaluePhonon attribute)
(sisl.physics.phonon.EigenvectorPhonon attribute)
(sisl.physics.phonon.ModeCPhonon attribute)
(sisl.physics.phonon.ModePhonon attribute)
shift() (sisl.physics.EnergyDensityMatrix method)
(sisl.physics.Hamiltonian method)
shot_noise() (sisl.io.tbtrans.phtavncSileTBtrans method)
(sisl.io.tbtrans.phtncSileTBtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
Sile (class in sisl.io)
SileBin (class in sisl.io)
SileCDF (class in sisl.io)
SileError
sisl (module)
sisl.constant (module)
,
[1]
sisl.geom (module)
sisl.io (module)
sisl.io.bigdft (module)
sisl.io.gulp (module)
sisl.io.openmx (module)
sisl.io.scaleup (module)
sisl.io.siesta (module)
sisl.io.tbtrans (module)
sisl.io.vasp (module)
sisl.io.wannier90 (module)
sisl.physics (module)
sisl.physics.brillouinzone (module)
sisl.physics.distribution (module)
sisl.physics.electron (module)
sisl.physics.phonon (module)
sisl.shape (module)
sisl.unit (module)
sisl.utils (module)
size (sisl.Grid attribute)
Sk() (sisl.physics.DensityMatrix method)
(sisl.physics.DynamicalMatrix method)
(sisl.physics.EigenstateElectron method)
(sisl.physics.EigenvectorElectron method)
(sisl.physics.EnergyDensityMatrix method)
(sisl.physics.Hamiltonian method)
(sisl.physics.SparseOrbitalBZ method)
(sisl.physics.SparseOrbitalBZSpin method)
(sisl.physics.electron.EigenstateElectron method)
(sisl.physics.electron.EigenvectorElectron method)
(sisl.physics.electron.StateCElectron method)
(sisl.physics.electron.StateElectron method)
sort() (sisl.physics.EigenmodePhonon method)
(sisl.physics.EigenstateElectron method)
(sisl.physics.StateC method)
(sisl.physics.electron.EigenstateElectron method)
(sisl.physics.electron.StateCElectron method)
(sisl.physics.phonon.EigenmodePhonon method)
(sisl.physics.phonon.ModeCPhonon method)
spalign() (sisl.physics.DensityMatrix method)
(sisl.SparseAtom method)
(sisl.SparseOrbital method)
(sisl.physics.DynamicalMatrix method)
(sisl.physics.EnergyDensityMatrix method)
(sisl.physics.Hamiltonian method)
(sisl.physics.SparseOrbitalBZ method)
(sisl.physics.SparseOrbitalBZSpin method)
SparseAtom (class in sisl)
SparseCSR (class in sisl)
SparseOrbital (class in sisl)
SparseOrbitalBZ (class in sisl.physics)
SparseOrbitalBZSpin (class in sisl.physics)
sparserij() (sisl.Geometry method)
specie (sisl.Atoms attribute)
spher() (sisl.AtomicOrbital method)
(sisl.Orbital method)
(sisl.SphericalOrbital method)
Sphere (class in sisl.shape)
SphericalOrbital (class in sisl)
Spin (class in sisl.physics)
spin (sisl.physics.DensityMatrix attribute)
(sisl.physics.EnergyDensityMatrix attribute)
(sisl.physics.Hamiltonian attribute)
(sisl.physics.SparseOrbitalBZSpin attribute)
spin_moment() (in module sisl.physics.electron)
(sisl.physics.EigenstateElectron method)
(sisl.physics.EigenvectorElectron method)
(sisl.physics.electron.EigenstateElectron method)
(sisl.physics.electron.EigenvectorElectron method)
(sisl.physics.electron.StateCElectron method)
(sisl.physics.electron.StateElectron method)
SPINORBIT (sisl.physics.Spin attribute)
spins (sisl.physics.Spin attribute)
spsame() (sisl.physics.DensityMatrix method)
(sisl.SparseAtom method)
(sisl.SparseCSR method)
(sisl.SparseOrbital method)
(sisl.physics.DynamicalMatrix method)
(sisl.physics.EnergyDensityMatrix method)
(sisl.physics.Hamiltonian method)
(sisl.physics.SparseOrbitalBZ method)
(sisl.physics.SparseOrbitalBZSpin method)
start() (sisl.Selector method)
State (class in sisl.physics)
state (sisl.physics.EigenmodePhonon attribute)
(sisl.physics.EigenstateElectron attribute)
(sisl.physics.EigenvectorElectron attribute)
(sisl.physics.EigenvectorPhonon attribute)
(sisl.physics.State attribute)
(sisl.physics.StateC attribute)
(sisl.physics.electron.EigenstateElectron attribute)
(sisl.physics.electron.EigenvectorElectron attribute)
(sisl.physics.electron.StateCElectron attribute)
(sisl.physics.electron.StateElectron attribute)
(sisl.physics.phonon.EigenmodePhonon attribute)
(sisl.physics.phonon.EigenvectorPhonon attribute)
(sisl.physics.phonon.ModeCPhonon attribute)
(sisl.physics.phonon.ModePhonon attribute)
StateC (class in sisl.physics)
StateCElectron (class in sisl.physics.electron)
StateElectron (class in sisl.physics.electron)
stop() (sisl.Selector method)
str_spec() (in module sisl.utils)
strerror (sisl.io.SileError attribute)
strmap() (in module sisl.utils)
strseq() (in module sisl.utils)
sub() (sisl.Atom method)
(sisl.Atoms method)
(sisl.Geometry method)
(sisl.Grid method)
(sisl.SparseAtom method)
(sisl.SparseCSR method)
(sisl.SparseOrbital method)
(sisl.physics.Coefficient method)
(sisl.physics.DensityMatrix method)
(sisl.physics.DynamicalMatrix method)
(sisl.physics.EigenmodePhonon method)
(sisl.physics.EigenstateElectron method)
(sisl.physics.EigenvalueElectron method)
(sisl.physics.EigenvaluePhonon method)
(sisl.physics.EigenvectorElectron method)
(sisl.physics.EigenvectorPhonon method)
(sisl.physics.EnergyDensityMatrix method)
(sisl.physics.Hamiltonian method)
(sisl.physics.SparseOrbitalBZ method)
(sisl.physics.SparseOrbitalBZSpin method)
(sisl.physics.State method)
(sisl.physics.StateC method)
(sisl.physics.electron.CoefficientElectron method)
(sisl.physics.electron.EigenstateElectron method)
(sisl.physics.electron.EigenvalueElectron method)
(sisl.physics.electron.EigenvectorElectron method)
(sisl.physics.electron.StateCElectron method)
(sisl.physics.electron.StateElectron method)
(sisl.physics.phonon.CoefficientPhonon method)
(sisl.physics.phonon.EigenmodePhonon method)
(sisl.physics.phonon.EigenvaluePhonon method)
(sisl.physics.phonon.EigenvectorPhonon method)
(sisl.physics.phonon.ModeCPhonon method)
(sisl.physics.phonon.ModePhonon method)
sub_part() (sisl.Grid method)
sum() (sisl.Grid method)
(sisl.SparseCSR method)
SuperCell (class in sisl)
swap() (sisl.Atoms method)
(sisl.Geometry method)
(sisl.SparseAtom method)
(sisl.SparseOrbital method)
(sisl.physics.DensityMatrix method)
(sisl.physics.DynamicalMatrix method)
(sisl.physics.EnergyDensityMatrix method)
(sisl.physics.Hamiltonian method)
(sisl.physics.SparseOrbitalBZ method)
(sisl.physics.SparseOrbitalBZSpin method)
swapaxes() (sisl.Geometry method)
(sisl.Grid method)
(sisl.SuperCell method)
symbol (sisl.Atom attribute)
T
tableSile (class in sisl.io.table)
tag (sisl.AtomicOrbital attribute)
(sisl.Orbital attribute)
(sisl.SphericalOrbital attribute)
tbtavncSileTBtrans (class in sisl.io.tbtrans)
tbtgfSileTBtrans (class in sisl.io.tbtrans)
tbtncSileTBtrans (class in sisl.io.tbtrans)
tbtsencSileTBtrans (class in sisl.io.tbtrans)
tile() (sisl.Atoms method)
(sisl.Geometry method)
(sisl.SparseAtom method)
(sisl.SparseOrbital method)
(sisl.SuperCell method)
(sisl.physics.DensityMatrix method)
(sisl.physics.DynamicalMatrix method)
(sisl.physics.EnergyDensityMatrix method)
(sisl.physics.Hamiltonian method)
(sisl.physics.SparseOrbitalBZ method)
(sisl.physics.SparseOrbitalBZSpin method)
toASE() (sisl.Geometry method)
toAtomicOrbital() (sisl.SphericalOrbital method)
tocartesian() (sisl.physics.BandStructure method)
(sisl.physics.BrillouinZone method)
(sisl.physics.MonkhorstPack method)
(sisl.physics.brillouinzone.BandStructure method)
(sisl.physics.brillouinzone.BrillouinZone method)
(sisl.physics.brillouinzone.MonkhorstPack method)
tocell() (sisl.SuperCell class method)
tocsr() (sisl.physics.DensityMatrix method)
(sisl.SparseAtom method)
(sisl.SparseCSR method)
(sisl.SparseOrbital method)
(sisl.physics.DynamicalMatrix method)
(sisl.physics.EnergyDensityMatrix method)
(sisl.physics.Hamiltonian method)
(sisl.physics.SparseOrbitalBZ method)
(sisl.physics.SparseOrbitalBZSpin method)
toCuboid() (sisl.shape.Cube method)
(sisl.SuperCell method)
(sisl.shape.Cuboid method)
(sisl.shape.Ellipsoid method)
(sisl.shape.NullShape method)
(sisl.shape.Shape method)
(sisl.shape.Sphere method)
toEllipsoid() (sisl.shape.Cube method)
(sisl.shape.Cuboid method)
(sisl.shape.Ellipsoid method)
(sisl.shape.NullShape method)
(sisl.shape.Shape method)
(sisl.shape.Sphere method)
toGrid() (sisl.AtomicOrbital method)
(sisl.Orbital method)
(sisl.SphericalOrbital method)
topyamg() (sisl.Grid method)
toreduced() (sisl.physics.BandStructure method)
(sisl.physics.BrillouinZone method)
(sisl.physics.MonkhorstPack method)
(sisl.physics.brillouinzone.BandStructure method)
(sisl.physics.brillouinzone.BrillouinZone method)
(sisl.physics.brillouinzone.MonkhorstPack method)
toSparseAtom() (sisl.physics.DensityMatrix method)
(sisl.SparseOrbital method)
(sisl.physics.DynamicalMatrix method)
(sisl.physics.EnergyDensityMatrix method)
(sisl.physics.Hamiltonian method)
(sisl.physics.SparseOrbitalBZ method)
(sisl.physics.SparseOrbitalBZSpin method)
toSphere() (sisl.Atom method)
(sisl.AtomicOrbital method)
(sisl.Orbital method)
(sisl.SphericalOrbital method)
(sisl.shape.Cube method)
(sisl.shape.Cuboid method)
(sisl.shape.Ellipsoid method)
(sisl.shape.NullShape method)
(sisl.shape.Shape method)
(sisl.shape.Sphere method)
translate() (sisl.Geometry method)
(sisl.SuperCell method)
translate_columns() (sisl.SparseCSR method)
transmission() (sisl.io.tbtrans.phtavncSileTBtrans method)
(sisl.io.tbtrans.phtncSileTBtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
transmission_bulk() (sisl.io.tbtrans.phtavncSileTBtrans method)
(sisl.io.tbtrans.phtncSileTBtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
transmission_eig() (sisl.io.tbtrans.phtavncSileTBtrans method)
(sisl.io.tbtrans.phtncSileTBtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
tsdeSileSiesta (class in sisl.io.siesta)
tsgfSileSiesta (class in sisl.io.siesta)
tshsSileSiesta (class in sisl.io.siesta)
tsvncSileSiesta (class in sisl.io.siesta)
type() (sisl.io.openmx.omxSileOpenMX method)
(sisl.io.siesta.fdfSileSiesta method)
U
unit (sisl.constant.PhysicalConstant attribute)
unit_convert() (in module sisl.unit)
unit_default() (in module sisl.unit)
unit_group() (in module sisl.unit)
units (in module sisl.unit)
UNPOLARIZED (sisl.physics.Spin attribute)
V
vector_current() (sisl.io.tbtrans.phtavncSileTBtrans method)
(sisl.io.tbtrans.phtncSileTBtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
vector_current_from_bond() (sisl.io.tbtrans.phtavncSileTBtrans method)
(sisl.io.tbtrans.phtncSileTBtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
velocity() (in module sisl.physics.electron)
(in module sisl.physics.phonon)
(sisl.physics.DynamicalMatrix method)
(sisl.physics.EigenmodePhonon method)
(sisl.physics.EigenstateElectron method)
(sisl.physics.Hamiltonian method)
(sisl.physics.electron.EigenstateElectron method)
(sisl.physics.electron.StateCElectron method)
(sisl.physics.phonon.EigenmodePhonon method)
(sisl.physics.phonon.ModeCPhonon method)
velocity_matrix() (in module sisl.physics.electron)
(sisl.physics.EigenstateElectron method)
(sisl.physics.electron.EigenstateElectron method)
(sisl.physics.electron.StateCElectron method)
volume (sisl.Geometry attribute)
(sisl.Grid attribute)
(sisl.SuperCell attribute)
volume() (sisl.shape.Cube method)
(sisl.shape.Cuboid method)
(sisl.shape.Ellipsoid method)
(sisl.shape.NullShape method)
(sisl.shape.Sphere method)
W
wavefunction() (in module sisl.physics.electron)
(sisl.physics.EigenstateElectron method)
(sisl.physics.EigenvectorElectron method)
(sisl.physics.electron.EigenstateElectron method)
(sisl.physics.electron.EigenvectorElectron method)
(sisl.physics.electron.StateCElectron method)
(sisl.physics.electron.StateElectron method)
weight (sisl.physics.BandStructure attribute)
(sisl.physics.BrillouinZone attribute)
(sisl.physics.MonkhorstPack attribute)
(sisl.physics.brillouinzone.BandStructure attribute)
(sisl.physics.brillouinzone.BrillouinZone attribute)
(sisl.physics.brillouinzone.MonkhorstPack attribute)
winSileWannier90 (class in sisl.io.wannier90)
with_traceback() (sisl.io.SileError method)
within() (sisl.Geometry method)
(sisl.shape.Cube method)
(sisl.shape.Cuboid method)
(sisl.shape.Ellipsoid method)
(sisl.shape.NullShape method)
(sisl.shape.Shape method)
(sisl.shape.Sphere method)
within_index() (sisl.shape.Cube method)
(sisl.shape.Cuboid method)
(sisl.shape.Ellipsoid method)
(sisl.shape.NullShape method)
(sisl.shape.Shape method)
(sisl.shape.Sphere method)
within_inf() (sisl.Geometry method)
within_sc() (sisl.Geometry method)
wk (sisl.io.tbtrans.phtavncSileTBtrans attribute)
(sisl.io.tbtrans.phtncSileTBtrans attribute)
(sisl.io.tbtrans.phtsencSileTBtrans attribute)
(sisl.io.tbtrans.tbtavncSileTBtrans attribute)
(sisl.io.tbtrans.tbtncSileTBtrans attribute)
(sisl.io.tbtrans.tbtsencSileTBtrans attribute)
wkpt (sisl.io.tbtrans.phtavncSileTBtrans attribute)
(sisl.io.tbtrans.phtncSileTBtrans attribute)
(sisl.io.tbtrans.phtsencSileTBtrans attribute)
(sisl.io.tbtrans.tbtavncSileTBtrans attribute)
(sisl.io.tbtrans.tbtncSileTBtrans attribute)
(sisl.io.tbtrans.tbtsencSileTBtrans attribute)
write() (sisl.Geometry method)
(sisl.Grid method)
(sisl.io.BaseSile method)
(sisl.io.Sile method)
(sisl.io.SileBin method)
(sisl.io.SileCDF method)
(sisl.io.bigdft.asciiSileBigDFT method)
(sisl.io.cube.cubeSile method)
(sisl.io.gulp.fcSileGULP method)
(sisl.io.gulp.gotSileGULP method)
(sisl.io.molden.moldenSile method)
(sisl.io.openmx.omxSileOpenMX method)
(sisl.io.pdb.pdbSile method)
(sisl.io.scaleup.orboccSileScaleUp method)
(sisl.io.scaleup.refSileScaleUp method)
(sisl.io.scaleup.rhamSileScaleUp method)
(sisl.io.siesta.bandsSileSiesta method)
(sisl.io.siesta.dmSileSiesta method)
(sisl.io.siesta.eigSileSiesta method)
(sisl.io.siesta.faSileSiesta method)
(sisl.io.siesta.fcSileSiesta method)
(sisl.io.siesta.fdfSileSiesta method)
(sisl.io.siesta.gridSileSiesta method)
(sisl.io.siesta.gridncSileSiesta method)
(sisl.io.siesta.hsxSileSiesta method)
(sisl.io.siesta.ionncSileSiesta method)
(sisl.io.siesta.ionxmlSileSiesta method)
(sisl.io.siesta.kpSileSiesta method)
(sisl.io.siesta.ncSileSiesta method)
(sisl.io.siesta.orbindxSileSiesta method)
(sisl.io.siesta.outSileSiesta method)
(sisl.io.siesta.pdosSileSiesta method)
(sisl.io.siesta.rkpSileSiesta method)
(sisl.io.siesta.tsdeSileSiesta method)
(sisl.io.siesta.tsgfSileSiesta method)
(sisl.io.siesta.tshsSileSiesta method)
(sisl.io.siesta.tsvncSileSiesta method)
(sisl.io.siesta.xvSileSiesta method)
(sisl.io.table.tableSile method)
(sisl.io.tbtrans.deltancSileTBtrans method)
(sisl.io.tbtrans.dhncSileTBtrans method)
(sisl.io.tbtrans.phtavncSileTBtrans method)
(sisl.io.tbtrans.phtncSileTBtrans method)
(sisl.io.tbtrans.phtsencSileTBtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtgfSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
(sisl.io.tbtrans.tbtsencSileTBtrans method)
(sisl.io.vasp.carSileVASP method)
(sisl.io.vasp.contcarSileVASP method)
(sisl.io.vasp.doscarSileVASP method)
(sisl.io.vasp.eigenvalSileVASP method)
(sisl.io.vasp.poscarSileVASP method)
(sisl.io.wannier90.winSileWannier90 method)
(sisl.io.xsf.xsfSile method)
(sisl.io.xyz.xyzSile method)
(sisl.physics.BandStructure method)
(sisl.physics.BrillouinZone method)
(sisl.physics.DensityMatrix method)
(sisl.physics.DynamicalMatrix method)
(sisl.physics.EnergyDensityMatrix method)
(sisl.physics.Hamiltonian method)
(sisl.physics.MonkhorstPack method)
(sisl.physics.brillouinzone.BandStructure method)
(sisl.physics.brillouinzone.BrillouinZone method)
(sisl.physics.brillouinzone.MonkhorstPack method)
write_basis() (sisl.io.siesta.ncSileSiesta method)
write_brillouinzone() (sisl.io.siesta.kpSileSiesta method)
(sisl.io.siesta.rkpSileSiesta method)
write_data() (sisl.io.siesta.faSileSiesta method)
(sisl.io.siesta.kpSileSiesta method)
(sisl.io.siesta.rkpSileSiesta method)
(sisl.io.table.tableSile method)
write_delta() (sisl.io.tbtrans.deltancSileTBtrans method)
(sisl.io.tbtrans.dhncSileTBtrans method)
write_density_matrix() (sisl.io.siesta.dmSileSiesta method)
(sisl.io.siesta.ncSileSiesta method)
(sisl.io.siesta.tsdeSileSiesta method)
write_dynamical_matrix() (sisl.io.siesta.ncSileSiesta method)
write_energy_density_matrix() (sisl.io.siesta.ncSileSiesta method)
write_force() (sisl.io.siesta.faSileSiesta method)
write_geometry() (sisl.io.bigdft.asciiSileBigDFT method)
(sisl.io.cube.cubeSile method)
(sisl.io.molden.moldenSile method)
(sisl.io.pdb.pdbSile method)
(sisl.io.scaleup.refSileScaleUp method)
(sisl.io.siesta.fdfSileSiesta method)
(sisl.io.siesta.ncSileSiesta method)
(sisl.io.siesta.xvSileSiesta method)
(sisl.io.tbtrans.deltancSileTBtrans method)
(sisl.io.tbtrans.dhncSileTBtrans method)
(sisl.io.tbtrans.phtavncSileTBtrans method)
(sisl.io.tbtrans.phtncSileTBtrans method)
(sisl.io.tbtrans.phtsencSileTBtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
(sisl.io.tbtrans.tbtsencSileTBtrans method)
(sisl.io.vasp.carSileVASP method)
(sisl.io.vasp.contcarSileVASP method)
(sisl.io.vasp.poscarSileVASP method)
(sisl.io.wannier90.winSileWannier90 method)
(sisl.io.xsf.xsfSile method)
(sisl.io.xyz.xyzSile method)
write_grid() (sisl.io.cube.cubeSile method)
(sisl.io.siesta.gridncSileSiesta method)
(sisl.io.siesta.tsvncSileSiesta method)
(sisl.io.xsf.xsfSile method)
write_hamiltonian() (sisl.io.siesta.ncSileSiesta method)
(sisl.io.siesta.tsgfSileSiesta method)
(sisl.io.siesta.tshsSileSiesta method)
(sisl.io.tbtrans.dhncSileTBtrans method)
(sisl.io.tbtrans.tbtgfSileTBtrans method)
write_header() (sisl.io.siesta.tsgfSileSiesta method)
(sisl.io.tbtrans.tbtgfSileTBtrans method)
write_overlap() (sisl.io.siesta.ncSileSiesta method)
write_self_energy() (sisl.io.siesta.tsgfSileSiesta method)
(sisl.io.tbtrans.tbtgfSileTBtrans method)
write_supercell() (sisl.io.cube.cubeSile method)
(sisl.io.molden.moldenSile method)
(sisl.io.pdb.pdbSile method)
(sisl.io.siesta.fdfSileSiesta method)
(sisl.io.siesta.gridncSileSiesta method)
(sisl.io.tbtrans.deltancSileTBtrans method)
(sisl.io.tbtrans.dhncSileTBtrans method)
(sisl.io.wannier90.winSileWannier90 method)
(sisl.io.xsf.xsfSile method)
write_tbtav() (sisl.io.tbtrans.phtavncSileTBtrans method)
(sisl.io.tbtrans.phtncSileTBtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
X
X (sisl.physics.Spin attribute)
xa (sisl.io.tbtrans.phtavncSileTBtrans attribute)
(sisl.io.tbtrans.phtncSileTBtrans attribute)
(sisl.io.tbtrans.phtsencSileTBtrans attribute)
(sisl.io.tbtrans.tbtavncSileTBtrans attribute)
(sisl.io.tbtrans.tbtncSileTBtrans attribute)
(sisl.io.tbtrans.tbtsencSileTBtrans attribute)
xsfSile (class in sisl.io.xsf)
xvSileSiesta (class in sisl.io.siesta)
xyz (sisl.io.tbtrans.phtavncSileTBtrans attribute)
(sisl.io.tbtrans.phtncSileTBtrans attribute)
(sisl.io.tbtrans.phtsencSileTBtrans attribute)
(sisl.io.tbtrans.tbtavncSileTBtrans attribute)
(sisl.io.tbtrans.tbtncSileTBtrans attribute)
(sisl.io.tbtrans.tbtsencSileTBtrans attribute)
xyzSile (class in sisl.io.xyz)
Y
Y (sisl.physics.Spin attribute)
Z
Z (sisl.AtomicOrbital attribute)
(sisl.Atoms attribute)
(sisl.physics.Spin attribute)
Z() (sisl.PeriodicTable method)
Z_int() (sisl.PeriodicTable method)
Z_label() (sisl.PeriodicTable method)
Z_short() (sisl.PeriodicTable method)
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v: v0.9.4
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